Evidence map›Paper›PMID 31413267›Full record

ArticleScientific reports2019

Intrinsic tryptophan fluorescence spectroscopy reliably determines galectin-ligand interactions.

Paulina Sindrewicz, Xiaoxin Li, Edwin A Yates, Jeremy E Turnbull, Lu-Yun Lian, Lu-Gang Yu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 90 citations in OpenAlex.

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  20. Unveiling the Excited State Dynamics of Indole in Solution.Journal of chemical theory and computation · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Paulina SindrewiczDepartment of Cellular and Molecular Physiology, Institute of translational Medicine, University of Liverpool, Liverpool, L69 3GE, UK.
Xiaoxin LiDepartment of Cellular and Molecular Physiology, Institute of translational Medicine, University of Liverpool, Liverpool, L69 3GE, UK.
Edwin A YatesDepartment of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK.
Jeremy E TurnbullDepartment of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK.
Lu-Yun LianDepartment of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK. lylian1@liv.ac.uk.
Lu-Gang YuDepartment of Cellular and Molecular Physiology, Institute of translational Medicine, University of Liverpool, Liverpool, L69 3GE, UK. lgyu@liv.ac.uk.
University of Liverpool · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D020794/1Medical Research Council G1000772Medical Research Council MR/L014327/1Medical Research Council MR/M009114/1
6 · The paper itself

Abstract

Galectins are involved in the regulation of divergent physiological and pathological processes and are increasingly recognized to play important roles in a number of diseases. However, a simple and effective way in assessing galectin-ligand interactions is lacking. Our examination of the sequence of all 12 human galectin members reveals the presence of one or more tryptophan residues in the carbohydrate-recognition domains of each galectin. This led us to investigate the possibility that alteration of the galectin intrinsic tryptophan fluorescence could be used in determining the strength of galectin-ligand interactions. One representative member from each of the three subtype galectins, galectin-2 (proto-), galectin-3 (chimera-) and galectin-4 (tandem repeat-type), was selected and analysed for galectin interaction with three ligands of different affinities: galactose, lactose and N-acetyl-lactosamine using tryptophan fluorescence spectroscopy (TFS) and, as a comparison, isothermal titration calorimetry (ITC). Good agreement between TFS and ITC measurements were revealed in ligand bindings of all galectin members. Moreover, TFS detected very weak galectin binding where ITC could not reliably do so. The reliability of TFS in determining galectin-ligand interactions was further validated by analysis of galectin-3 interaction with a semisynthetic ligand, F3. Thus, TFS can be used as a simple, sensitive and reliable way to determine galectin-ligand interactions and also as a drug-discovery platform in developing galectin-targeted therapeutic drugs.

Indexed as

Amino Acid SequenceAnimalsCalorimetryChickensGalectinsHeparinHumansLigandsProtein DomainsSpectrometry, FluorescenceTryptophanGalectinsHeparinLigandsTryptophan

Identifiers

PMID31413267
PMCPMC6694196
OpenAlexW2968692331

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.