Evidence map›Paper›PMID 31412198›Full record

ArticleAnalytical chemistry2019

Lipid Coverage in Nanospray Desorption Electrospray Ionization Mass Spectrometry Imaging of Mouse Lung Tissues.

Son N Nguyen, Jennifer E Kyle, Sydney E Dautel, Ryan Sontag, Teresa Luders, Richard Corley, Charles Ansong, James Carson, Julia Laskin

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
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  7. Review
  8. Quantitative mass spectrometry imaging: therapeutics & biomolecules.Chemical communications (Cambridge, England) · 2024
    Review
  9. Recent Analytical Methodologies in Lipid Analysis.International journal of molecular sciences · 2024
    Review
  10. LungMAP Portal Ecosystem: Systems-level Exploration of the Lung.American journal of respiratory cell and molecular biology · 2024
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Clinical Chemistry for Developing Countries: Mass Spectrometry.Annual review of analytical chemistry (Palo Alto, Calif.) · 2021
    Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Son N NguyenPhysical Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.ORCID 0000-0002-6563-1685
Jennifer E KyleBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
Sydney E DautelBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
Ryan SontagBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
Teresa LudersBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
Richard CorleyBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
Charles AnsongBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.
James CarsonTexas Advanced Computing Center , University of Texas at Austin , Austin , Texas 78758 , United States.
Julia LaskinPhysical Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99352 , United States.ORCID 0000-0002-4533-9644
Pacific Northwest National Laboratory · US

Funding

Center for Lung Development Imaging and OmicsU01HL122703 · NHLBI · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI ANSONG, CHARLES K, CARSON, JAMES PAUL · 2014 to 2018
$4.5M
NHLBI NIH HHS U01 HL122703
6 · The paper itself

Abstract

Lipids are a naturally occurring group of molecules that not only contribute to the structural integrity of the lung preventing alveolar collapse but also play important roles in the anti-inflammatory responses and antiviral protection. Alteration in the type and spatial localization of lipids in the lung plays a crucial role in various diseases, such as respiratory distress syndrome (RDS) in preterm infants and oxidative stress-influenced diseases, such as pneumonia, emphysema, and lung cancer following exposure to environmental stressors. The ability to accurately measure spatial distributions of lipids and metabolites in lung tissues provides important molecular insights related to lung function, development, and disease states. Nanospray desorption electrospray ionization (nano-DESI) and other ambient ionization mass spectrometry techniques enable label-free imaging of complex samples in their native state with minimal to absolutely no sample preparation. However, lipid coverage obtained in nano-DESI mass spectrometry imaging (MSI) experiments has not been previously characterized. In this work, the depth of lipid coverage in nano-DESI MSI of mouse lung tissues was compared to liquid chromatography tandem mass spectrometry (LC-MS/MS) lipidomics analysis of tissue extracts prepared using two different procedures: standard Folch extraction method of the whole lung samples and extraction into a 90% methanol/10% water mixture used in nano-DESI MSI experiments. A combination of positive and negative ionization mode nano-DESI MSI identified 265 unique lipids across 20 lipids subclasses and 19 metabolites (284 in total) in mouse lung tissues. Except for triacylglycerols (TG) species, nano-DESI MSI provided comparable coverage to LC-MS/MS experiments performed using methanol/water tissue extracts and up to 50% coverage in comparison with the Folch extraction-based whole lung lipidomics analysis. These results demonstrate the utility of nano-DESI MSI for comprehensive spatially resolved analysis of lipids in tissue sections. A combination of nano-DESI MSI and LC-MS/MS lipidomics is particularly useful for exploring changes in lipid distributions during lung development, as well as resulting from disease or exposure to environmental toxicants.

Indexed as

AnimalsChromatography, LiquidLipidomicsLipidsLungMice, Inbred C57BLSpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryLipids

Identifiers

PMID31412198
PMCPMC9413397
OpenAlexW2968640509

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.