Evidence map›Paper›PMID 31410373›Full record

ArticleNetwork neuroscience (Cambridge, Mass.)2019

Exact topological inference of the resting-state brain networks in twins.

Moo K Chung, Hyekyoung Lee, Alex DiChristofano, Hernando Ombao, Victor Solo

Abstract read
In one paragraph

Article in Network neuroscience (Cambridge, Mass.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

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  14. Hodge Laplacian of Brain Networks.IEEE transactions on medical imaging · 2023
    Article
  15. TOPOLOGICAL LEARNING FOR BRAIN NETWORKS.The annals of applied statistics · 2023
    Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Moo K ChungUniversity of Wisconsin, Madison, WI, USA.
Hyekyoung LeeSeoul National University, Seoul, Korea.
Alex DiChristofanoWashington University, St. Louis, USA.
Hernando OmbaoKing Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Victor SoloUniversity of New South Wales, Sydney, Australia.

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
BRAIN Initiative: Theories, Models and Methods for Analysis of Complex Data from the BrainR01EB022856 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2016 to 2018
$1.1M
NCATS NIH HHS UL1 TR000427NIBIB NIH HHS R01 EB022856
6 · The paper itself

Abstract

A cycle in a brain network is a subset of a connected component with redundant additional connections. If there are many cycles in a connected component, the connected component is more densely connected. Whereas the number of connected components represents the integration of the brain network, the number of cycles represents how strong the integration is. However, it is unclear how to perform statistical inference on the number of cycles in the brain network. In this study, we present a new statistical inference framework for determining the significance of the number of cycles through the Kolmogorov-Smirnov (KS) distance, which was recently introduced to measure the similarity between networks across different filtration values by using the zeroth Betti number. In this paper, we show how to extend the method to the first Betti number, which measures the number of cycles. The performance analysis was conducted using the random network simulations with ground truths. By using a twin imaging study, which provides biological ground truth, the methods are applied in determining if the number of cycles is a statistically significant heritable network feature in the resting-state functional connectivity in 217 twins obtained from the Human Connectome Project. The MATLAB codes as well as the connectivity matrices used in generating results are provided at http://www.stat.wisc.edu/∼mchung/TDA.

Indexed as

Betti numbersCyclesFunctional brain networksPersistent homologyResting-state fMRITwin imaging studies

Identifiers

PMID31410373
PMCPMC6663192

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.