Evidence map›Paper›PMID 31409826›Full record

ArticleScientific reports2019

Metataxonomic analyses reveal differences in aquifer bacterial community as a function of creosote contamination and its potential for contaminant remediation.

Aline Daniela Lopes Júlio, Ubiana de Cássia Mourão Silva, Julliane Dutra Medeiros, Daniel Kumazawa Morais, Vera Lúcia Dos Santos

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Microbial fuel cells to monitor natural attenuation around groundwater plumes.Environmental science and pollution research international · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Aline Daniela Lopes JúlioLaboratory of Applied Microbiology, Microbiology Department, Institute of Biological Science, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
Ubiana de Cássia Mourão SilvaLaboratory of Applied Microbiology, Microbiology Department, Institute of Biological Science, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
Julliane Dutra MedeirosBiosystems Informatics and Genomics Group, René Rachou Research Center/Fiocruz-MG, Belo Horizonte, MG, Brazil.
Daniel Kumazawa MoraisLaboratory of Environmental Microbiology, Institute of Microbiology of the Czech Academy of Sciences - CAS, Prague, Czech Republic.ORCID http://orcid.org/0000-0002-6979-7826
Vera Lúcia Dos SantosLaboratory of Applied Microbiology, Microbiology Department, Institute of Biological Science, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil. verabio@gmail.com.
Universidade Federal de Minas Gerais · BRInstitute of Microbiology · BY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metataxonomic approach was used to describe the bacterial community from a creosote-contaminated aquifer and to access the potential for in situ bioremediation of the polycyclic aromatic hydrocarbons (PAHs) by biostimulation. In general, the wells with higher PAH contamination had lower richness and diversity than others, using the Shannon and Simpson indices. By the principal coordinate analysis (PCoA) it was possible to observe the clustering of the bacterial community of most wells in response of the presence of PAH contamination. The significance analysis using edgeR package of the R program showed variation in the abundance of some Operational Taxonomic Units (OTUs) of contaminated wells compared to uncontaminated ones. Taxons enriched in the contaminated wells were correlated positively (p < 0.05) with the hydrocarbons, according to redundancy analysis (RDA). All these enriched taxa have been characterized as PAH degrading agents, such as the genus Comamonas, Geobacter, Hydrocarboniphaga, Anaerolinea and Desulfomonile. Additionally, it was possible to predict, with the PICRUSt program, a greater proportion of pathways and genes related to the degradation of PAHs in the wells with higher contamination levels. We conclude that the contaminants promoted the enrichment of several groups of degrading bacteria in the area, which strengthens the feasibility of applying biostimulation as an aquifer remediation strategy.

Indexed as

DNA Barcoding, TaxonomicWater MicrobiologyBacteriaBiodegradation, EnvironmentalCluster AnalysisCreosoteEnvironmental MicrobiologyGroundwaterHydrocarbonsVolatile Organic CompoundsCreosoteHydrocarbonsVolatile Organic Compounds

Identifiers

PMID31409826
PMCPMC6692397
OpenAlexW2968831094

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.