Evidence map›Paper›PMID 31409781›Full record

ArticleNature communications2019

RIG-I-like receptors direct inflammatory macrophage polarization against West Nile virus infection.

Amy E L Stone, Richard Green, Courtney Wilkins, Emily A Hemann, Michael Gale

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  5. Exploring the causal impact of mitochondrial dysfunction on epilepsy: a mendelian randomization study.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas · 2026
    Article
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  7. Review
  8. Article
  9. Article
  10. Review
  11. Macrophage fate: to kill or not to kill?Infection and immunity · 2024
    Review
  12. Article
  13. Article
  14. Review
  15. Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Amy E L StoneDepartment of Immunology and Center for Innate Immunity and Immune Disease, University of Washington, Seattle, WA, 98109, USA.
Richard GreenDepartment of Immunology and Center for Innate Immunity and Immune Disease, University of Washington, Seattle, WA, 98109, USA.
Courtney WilkinsDepartment of Immunology and Center for Innate Immunity and Immune Disease, University of Washington, Seattle, WA, 98109, USA.
Emily A HemannDepartment of Immunology and Center for Innate Immunity and Immune Disease, University of Washington, Seattle, WA, 98109, USA.ORCID http://orcid.org/0000-0002-6398-3492
Michael GaleDepartment of Immunology and Center for Innate Immunity and Immune Disease, University of Washington, Seattle, WA, 98109, USA. mgale@uw.edu.ORCID http://orcid.org/0000-0002-6332-7436
University of Washington · US

Funding

Washington National Primate Research CenterP51OD010425 · OD · UNIVERSITY OF WASHINGTON · PI Mari Ostendorf · 2012 to 2026
$201.8M
Unlocking Zika Virus Immune Control and Pathogenesis with the Collaborative CrossU19AI100625 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HEISE, MARK T · 2012 to 2021
$36.6M
West Nile Virus and host control of innate defensesU19AI083019 · NIAID · UNIVERSITY OF WASHINGTON · PI GALE, MICHAEL · 2009 to 2018
$22.5M
Diseases of Public Health Importance Training GrantT32AI007509 · NIAID · UNIVERSITY OF WASHINGTON · PI LUND, JENNIFER M · 1997 to 2024
$6.3M
Innate Immune Control of West Nile VirusR01AI104002 · NIAID · UNIVERSITY OF WASHINGTON · PI DIAMOND, MICHAEL S, GALE, MICHAEL · 2013 to 2017
$3.7M
LGP2's Role in Controlling Innate ImmunityF32AI124520 · NIAID · UNIVERSITY OF WASHINGTON · PI STONE, AMY E · 2016 to 2017
$95k
NIAID NIH HHS F32 AI124520NIAID NIH HHS R01 AI104002NIAID NIH HHS T32 AI007509NIAID NIH HHS U19 AI083019NIAID NIH HHS U19 AI100625NIH HHS P51 OD010425
6 · The paper itself

Abstract

RIG-I-Like Receptors (RLRs) RIG-I, MDA5, and LGP2, are vital pathogen recognition receptors in the defense against RNA viruses. West Nile Virus (WNV) infections continue to grow in the US. Here, we use a systems biology approach to define the contributions of each RLR in the innate immune response to WNV. Genome-wide RNAseq and bioinformatics analyses of macrophages from mice lacking either RLR reveal that the RLRs drive distinct immune gene activation and response polarization to mediate an M1/inflammatory signature while suppressing the M2/wound healing phenotype. While LGP2 functions to modulate inflammatory signaling, RIG-I and MDA5 together are essential for M1 macrophage polarization in vivo and the control of WNV infection through potential downstream control of ATF4 and SMAD4 to regulate target gene expression for cell polarization. These analyses reveal the RLR-driven signature of macrophage polarization, innate immune protection, and immune programming against WNV infection.

Indexed as

AnimalsCell PolarityDEAD Box Protein 58FemaleHumansInterferon-Induced Helicase, IFIH1MacrophagesMaleMiceMice, Inbred C57BLMice, KnockoutWest Nile FeverWest Nile virusDEAD Box Protein 58Ifih1 protein, mouseInterferon-Induced Helicase, IFIH1

Identifiers

PMID31409781
PMCPMC6692387
OpenAlexW2967870347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.