Evidence map›Paper›PMID 31409629›Full record

ArticleThe Plant cell2019

Heterogeneous Nuclear Ribonucleoprotein H1 Coordinates with Phytochrome and the U1 snRNP Complex to Regulate Alternative Splicing in

Chueh-Ju Shih, Hsiang-Wen Chen, Hsin-Yu Hsieh, Yung-Hua Lai, Fang-Yi Chiu, Yu-Rong Chen, Shih-Long Tu

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. SWAP1-SFPS-RRC1 splicing factor complex modulates pre-mRNA splicing to promote photomorphogenesis inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Light-regulated pre-mRNA splicing in plants.Current opinion in plant biology · 2021
    Review
  13. Phytochrome Signaling Networks.Annual review of plant biology · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chueh-Ju ShihInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-2864-8541
Hsiang-Wen ChenInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-2574-6127
Hsin-Yu HsiehInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0001-8457-6872
Yung-Hua LaiInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0001-5020-400X
Fang-Yi ChiuInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-8664-8726
Yu-Rong ChenInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-4051-8619
Shih-Long TuInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan tsl@gate.sinica.edu.tw.ORCID 0000-0001-9436-278X
Institute of Plant and Microbial Biology, Academia Sinica · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant photoreceptors tightly regulate gene expression to control photomorphogenic responses. Although gene expression is modulated by photoreceptors at various levels, the regulatory mechanism at the pre-mRNA splicing step remains unclear. Alternative splicing, a widespread mechanism in eukaryotes that generates two or more mRNAs from the same pre-mRNA, is largely controlled by splicing regulators, which recruit spliceosomal components to initiate pre-mRNA splicing. The red/far-red light photoreceptor phytochrome participates in light-mediated splicing regulation, but the detailed mechanism remains unclear. Here, using protein-protein interaction analysis, we demonstrate that in the moss

Indexed as

Alternative SplicingBryopsidaGene OntologyGenome-Wide Association StudyHeterogeneous-Nuclear Ribonucleoprotein Group F-HLightPhotoreceptors, PlantPhytochromeProtein BindingProtein Interaction MappingRibonucleoprotein, U1 Small NuclearRNA, MessengerRNA PrecursorsRNA Splicing FactorsSpliceosomesHeterogeneous-Nuclear Ribonucleoprotein Group F-HPhotoreceptors, PlantPhytochromeRibonucleoprotein, U1 Small NuclearRNA, MessengerRNA PrecursorsRNA Splicing Factors

Identifiers

PMID31409629
PMCPMC6790087
OpenAlexW2968927049

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.