Evidence map›Paper›PMID 31408975›Full record

ArticleMolecules (Basel, Switzerland)2019

Structural and Aggregation Features of a Human κ-Casein Fragment with Antitumor and Cell-Penetrating Properties.

Olga A Chinak, Andrey V Shernyukov, Sergey S Ovcherenko, Evgeniy A Sviridov, Victor M Golyshev, Alexander S Fomin, Inna A Pyshnaya, Elena V Kuligina, Vladimir A Richter, Elena G Bagryanskaya

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Olga A ChinakInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.
Andrey V ShernyukovN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS, Novosibirsk 630090, Russia.
Sergey S OvcherenkoN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS, Novosibirsk 630090, Russia.
Evgeniy A SviridovN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS, Novosibirsk 630090, Russia.
Victor M GolyshevInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.ORCID 0000-0002-0521-6228
Alexander S FominInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.
Inna A PyshnayaInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.ORCID 0000-0002-7559-2376
Elena V KuliginaInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.
Vladimir A RichterInstitute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk 630090, Russia.
Elena G BagryanskayaN.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS, Novosibirsk 630090, Russia. egbagryanskaya@nioch.nsc.ru.ORCID 0000-0003-0057-383X
Institute of Chemical Biology and Fundamental Medicine · RUNovosibirsk State University · RU

Funding

Ministry of Science and Education of the Russian Federation. grant No. 14.W03.31.0034)Russian Science Foundation grant No. 14-14-00922
6 · The paper itself

Abstract

Intrinsically disordered proteins play a central role in dynamic regulatory and assembly processes in the cell. Recently, a human κ-casein proteolytic fragment called lactaptin (8.6 kDa) was found to induce apoptosis of human breast adenocarcinoma MCF-7 and MDA-MB-231 cells with no cytotoxic activity toward normal cells. Earlier, we had designed some recombinant analogs of lactaptin and compared their biological activity. Among these analogs, RL2 has the highest antitumor activity, but the amino acid residues and secondary structures that are responsible for RL2's activity remain unclear. To elucidate the structure-activity relations of RL2, we studied the structural and aggregation features of this fairly large intrinsically disordered fragment of human milk κ-casein by a combination of physicochemical methods: NMR, paramagnetic relaxation enhancement (PRE), Electron Paramagnetic Resonance (EPR), circular dichroism, dynamic light scattering, atomic force microscopy, and a cytotoxic activity assay. It was found that in solution, RL2 exists as stand-alone monomeric particles and large aggregates. Whereas the disulfide-bonded homodimer turned out to be more prone to assembly into large aggregates, the monomer predominantly forms single particles. NMR relaxation analysis of spin-labeled RL2 showed that the RL2 N-terminal region, which is essential not only for multimerization of the peptide but also for its proapoptotic action on cancer cells, is more ordered than its C-terminal counterpart and contains a site with a propensity for α-helical secondary structure.

Indexed as

Amino Acid SequenceAntineoplastic AgentsCaseinsCell Line, TumorCell-Penetrating PeptidesCell SurvivalCloning, MolecularEscherichia coliGene ExpressionGenetic VectorsHumansIntrinsically Disordered ProteinsMCF-7 CellsProtein AggregatesProtein MultimerizationProtein Structure, SecondaryAntineoplastic AgentsCaseinsCell-Penetrating PeptidesIntrinsically Disordered Proteinslactaptin, humanProtein AggregatesRecombinant Proteinscasein micelledimerizationdisulfide bondintrinsically disordered proteinβ-mercaptoethanol adduct

Identifiers

PMID31408975
PMCPMC6721048
OpenAlexW2967949689

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.