Evidence map›Paper›PMID 31408463›Full record

ArticlePloS one2019

The oncoprotein DEK affects the outcome of PARP1/2 inhibition during mild replication stress.

Magdalena Ganz, Christopher Vogel, Christina Czada, Vera Jörke, Eva Christina Gwosch, Rebecca Kleiner, Agnieszka Pierzynska-Mach, Francesca Cella Zanacchi, Alberto Diaspro, Ferdinand Kappes and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 4 countries.

Magdalena GanzDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Christopher VogelDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Christina CzadaDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Vera JörkeDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Eva Christina GwoschDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Rebecca KleinerDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.
Agnieszka Pierzynska-MachNanoscopy and NIC@IIT, Istituto Italiano di Tecnologia, Genoa, Italy.
Francesca Cella ZanacchiNanoscopy and NIC@IIT, Istituto Italiano di Tecnologia, Genoa, Italy.
Alberto DiasproNanoscopy and NIC@IIT, Istituto Italiano di Tecnologia, Genoa, Italy.
Ferdinand KappesXi'an Jiaotong-Liverpool University, Dushu Lake Higher Education Town, Suzhou, China.ORCID 0000-0002-0369-0065
Alexander BürkleDepartment of Biology, Molecular Toxicology Group, University of Konstanz, Konstanz, Germany.
Elisa Ferrando-MayDepartment of Biology, Bioimaging Center, University of Konstanz, Konstanz, Germany.ORCID 0000-0002-5567-8690
University of Konstanz · DEItalian Institute of Technology · ITXi’an Jiaotong-Liverpool University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication stress is a major source of genomic instability and is closely linked to tumor formation and progression. Poly(ADP-ribose)polymerases1/2 (PARP1/2) enzymes are activated in response to replication stress resulting in poly(ADP-ribose) (PAR) synthesis. PARylation plays an important role in the remodelling and repair of impaired replication forks, providing a rationale for targeting highly replicative cancer cells with PARP1/2 inhibitors. The human oncoprotein DEK is a unique, non-histone chromatin architectural protein whose deregulated expression is associated with the development of a wide variety of human cancers. Recently, we showed that DEK is a high-affinity target of PARylation and that it promotes the progression of impaired replication forks. Here, we investigated a potential functional link between PAR and DEK in the context of replication stress. Under conditions of mild replication stress induced either by topoisomerase1 inhibition with camptothecin or nucleotide depletion by hydroxyurea, we found that the effect of acute PARP1/2 inhibition on replication fork progression is dependent on DEK expression. Reducing DEK protein levels also overcomes the restart impairment of stalled forks provoked by blocking PARylation. Non-covalent DEK-PAR interaction via the central PAR-binding domain of DEK is crucial for counteracting PARP1/2 inhibition as shown for the formation of RPA positive foci in hydroxyurea treated cells. Finally, we show by iPOND and super resolved microscopy that DEK is not directly associated with the replisome since it binds to DNA at the stage of chromatin formation. Our report sheds new light on the still enigmatic molecular functions of DEK and suggests that DEK expression levels may influence the sensitivity of cancer cells to PARP1/2 inhibitors.

Indexed as

DNA DamageDNA ReplicationBone NeoplasmsChromosomal Proteins, Non-HistoneGenomic InstabilityHumansOncogene ProteinsOsteosarcomaPoly-ADP-Ribose Binding ProteinsPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesTumor Cells, CulturedChromosomal Proteins, Non-HistoneDEK protein, humanOncogene ProteinsPARP1 protein, humanPARP2 protein, humanPoly-ADP-Ribose Binding ProteinsPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) Polymerases

Identifiers

PMID31408463
PMCPMC6692024
OpenAlexW2966957790

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.