Evidence map›Paper›PMID 31406373›Full record

ArticleNature chemical biology2019

Structure and chemistry of lysinoalanine crosslinking in the spirochaete flagella hook.

Michael J Lynch, Michael Miller, Milinda James, Sheng Zhang, Kai Zhang, Chunhao Li, Nyles W Charon, Brian R Crane

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. An overview of the structure and function of the flagellar hook FlgE protein.World journal of microbiology & biotechnology · 2023
    Review
  9. Article
  10. Studies on enmetazobactam clarify mechanisms of widely used β-lactamase inhibitors.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Michael J LynchDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA.
Michael MillerDepartment of Biochemistry, Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV, USA.
Milinda JamesDepartment of Microbiology, Immunology, and Cell Biology, Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV, USA.
Sheng ZhangProteomics Facility, Institute of Biotechnology, Cornell University, Ithaca, NY, USA.
Kai ZhangPhilips Institute for Oral Health Research, Virginia Commonwealth University School of Dentistry, Richmond, VA, USA.
Chunhao LiPhilips Institute for Oral Health Research, Virginia Commonwealth University School of Dentistry, Richmond, VA, USA.
Nyles W CharonDepartment of Microbiology, Immunology, and Cell Biology, Robert C. Byrd Health Sciences Center, West Virginia University, Morgantown, WV, USA.
Brian R CraneDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA. bc69@cornell.edu.ORCID http://orcid.org/0000-0001-8234-9991
Cornell University · USWest Virginia University · USVirginia Commonwealth University · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
Training and OutreachP30GM124166 · NIGMS · CORNELL UNIVERSITY · PI RICHARD A. CERIONE · 2019 to 2026
$28.3M
Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Molecular Mechanisms of Signal Transduction Involving Light, Redox and Transmembrane ComplexesR35GM122535 · NIGMS · CORNELL UNIVERSITY · PI BRIAN R CRANE · 2017 to 2026
$7.1M
Understanding Unique Aspects of Motility and Chemotaxis in Borrelia burgdorferiR01AI078958 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI Chunhao Chris Li · 2008 to 2026
$5.7M
CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
Exploring New Virulence Factors of the Oral Spirochete Treponema denticolaR01DE023080 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI Chunhao Chris Li · 2013 to 2026
$5.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Protein-protein covalent bonding and Treponema motilityR01DE023431 · NIDCR · WEST VIRGINIA UNIVERSITY · PI CHARON, NYLES, MILLER, MICHAEL R · 2013 to 2017
$1.9M
Acquisition of a Hybrid Quadrupole Time of Flight LC-MS/MS System for the CornellS10OD017992 · OD · CORNELL UNIVERSITY · PI ZHANG, SHENG · 2014 to 2014
$600k
NIAID NIH HHS R01 AI078958NIDCR NIH HHS R01 DE023080NIDCR NIH HHS R01 DE023431NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P30 GM124166NIGMS NIH HHS P41 GM103485NIGMS NIH HHS R35 GM122535NIGMS NIH HHS T32 GM008500NIH HHS S10 OD017992NIH HHS S10 OD021527
6 · The paper itself

Abstract

The flagellar hook protein FlgE from spirochaete bacteria self-catalyzes the formation of an unusual inter-subunit lysinoalanine (Lal) crosslink that is critical for cell motility. Unlike other known examples of Lal biosynthesis, conserved cysteine and lysine residues in FlgE spontaneously react to form Lal without the involvement of additional enzymes. Oligomerization of FlgE via its D0 and Dc domains drives assembly of the crosslinking site at the D1-D2 domain interface. Structures of the FlgE

Indexed as

Bacterial ProteinsCloning, MolecularDithionitrobenzoic AcidFlagellaHydrogen-Ion ConcentrationLysinoalanineModels, MolecularProtein ConformationTreponema denticolaBacterial ProteinsDithionitrobenzoic AcidLysinoalanine

Identifiers

PMID31406373
PMCPMC6764852
OpenAlexW2967502564

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.