Evidence map›Paper›PMID 31406371›Full record

ArticleNature chemical biology2019

A split CRISPR-Cpf1 platform for inducible genome editing and gene activation.

Yuta Nihongaki, Takahiro Otabe, Yoshibumi Ueda, Moritoshi Sato

Abstract read
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In one paragraph

Article in Nature chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Light-Triggered CRISPR/Cas12a for Genomic Editing and Tumor Regression.Angewandte Chemie (International ed. in English) · 2025
    Article
  9. Article
  10. Article
  11. A Red Light-Activatable Endogenous Gene Transcription System with Red-CPTS.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  12. Review
  13. The realization of CRISPR gene therapy.Nature chemical biology · 2024
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yuta Nihongaki *Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Takahiro Otabe *Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Yoshibumi UedaGraduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Moritoshi SatoGraduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan. cmsato@mail.ecc.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0002-3095-5831

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CRISPR-Cpf1 endonuclease has recently been demonstrated as a powerful tool to manipulate targeted gene sequences. Here, we performed an extensive screening of split Cpf1 fragments and identified a pair that, combined with inducible dimerization domains, enables chemical- and light-inducible genome editing in human cells. We also identified another split Cpf1 pair that is spontaneously activated. The newly generated amino and carboxyl termini of the spontaneously activated split Cpf1 can be repurposed as de novo fusion sites of artificial effector domains. Based on this finding, we generated an improved split dCpf1 activator, which has the potential to activate endogenous genes more efficiently than a previously established dCas9 activator. Finally, we showed that the split dCpf1 activator can efficiently activate target genes in mice. These results demonstrate that the present split Cpf1 provides an efficient and sophisticated genome manipulation in the fields of basic research and biotechnological applications.

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsAnimalsAnti-Bacterial AgentsBacterial ProteinsCRISPR-Associated ProteinsEndodeoxyribonucleasesEndonucleasesGene EditingGene Expression Regulation, EnzymologicHEK293 CellsHumansINDEL MutationLuciferasesMicePlasmidsReproductionAnti-Bacterial AgentsBacterial ProteinsCas12a proteinCRISPR-Associated ProteinsEndodeoxyribonucleasesEndonucleasesLuciferasesRNASirolimus

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.