Evidence map›Paper›PMID 31406271›Full record

ArticleScientific reports2019

SMARCA2-deficiency confers sensitivity to targeted inhibition of SMARCA4 in esophageal squamous cell carcinoma cell lines.

Katharina Ehrenhöfer-Wölfer, Teresa Puchner, Cornelia Schwarz, Janine Rippka, Silvia Blaha-Ostermann, Ursula Strobl, Alexandra Hörmann, Gerd Bader, Stefan Kornigg, Stephan Zahn and 12 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 50 citations in OpenAlex.

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  10. Chromatin remodellers as therapeutic targets.Nature reviews. Drug discovery · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 2 countries.

Katharina Ehrenhöfer-WölferBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.ORCID http://orcid.org/0000-0002-8893-6131
Teresa PuchnerBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Cornelia SchwarzBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Janine RippkaBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Silvia Blaha-OstermannBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Ursula StroblBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Alexandra HörmannBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Gerd BaderBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.ORCID http://orcid.org/0000-0002-8410-3415
Stefan KorniggBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Stephan ZahnBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Wolfgang SommergruberBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Norbert SchweiferBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Thomas ZichnerBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.ORCID http://orcid.org/0000-0001-9848-7598
Andreas SchlattlBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Ralph A NeumüllerBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Junwei ShiDepartment of Cancer Biology, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-8427-6316
Christopher R VakocCold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.
Manfred KöglBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Mark PetronczkiBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Norbert KrautBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Mark A PearsonBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria.
Simon WöhrleBoehringer Ingelheim RCV GmbH & Co KG, 1120, Vienna, Austria. simon.woehrle@boehringer-ingelheim.com.ORCID http://orcid.org/0000-0002-2478-7333
Boehringer Ingelheim (Austria) · ATCold Spring Harbor Laboratory · USUniversity of Pennsylvania · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI William Richard McCombie · 1985 to 2026
$116.8M
NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA045508
6 · The paper itself

Abstract

SMARCA4/BRG1 and SMARCA2/BRM, the two mutually exclusive catalytic subunits of the BAF complex, display a well-established synthetic lethal relationship in SMARCA4-deficient cancers. Using CRISPR-Cas9 screening, we identify SMARCA4 as a novel dependency in SMARCA2-deficient esophageal squamous cell carcinoma (ESCC) models, reciprocal to the known synthetic lethal interaction. Restoration of SMARCA2 expression alleviates the dependency on SMARCA4, while engineered loss of SMARCA2 renders ESCC models vulnerable to concomitant depletion of SMARCA4. Dependency on SMARCA4 is linked to its ATPase activity, but not to bromodomain function. We highlight the relevance of SMARCA4 as a drug target in esophageal cancer using an engineered ESCC cell model harboring a SMARCA4 allele amenable to targeted proteolysis and identify SMARCA4-dependent cell models with low or absent SMARCA2 expression from additional tumor types. These findings expand the concept of SMARCA2/SMARCA4 paralog dependency and suggest that pharmacological inhibition of SMARCA4 represents a novel therapeutic opportunity for SMARCA2-deficient cancers.

Indexed as

Antineoplastic AgentsCell Line, TumorCell SurvivalCRISPR-Cas SystemsDNA HelicasesEpigenesis, GeneticEsophageal NeoplasmsEsophageal Squamous Cell CarcinomaGene EditingGene Expression Regulation, NeoplasticGene Knockdown TechniquesGene Knockout TechniquesHumansLoss of Function MutationMolecular Targeted TherapyNuclear ProteinsAntineoplastic AgentsDNA HelicasesNuclear ProteinsRNA, Guide, CRISPR-Cas SystemsRNA, Small InterferingSMARCA2 protein, humanSMARCA4 protein, humanTranscription Factors

Identifiers

PMID31406271
PMCPMC6691015
OpenAlexW2969046589

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.