Evidence map›Paper›PMID 31406231›Full record

ArticleScientific reports2019

Role of Hydrogen Bonding in Green Fluorescent Protein-like Chromophore Emission.

Li Yang, Shifeng Nian, Guozhen Zhang, Edward Sharman, Hui Miao, Xuepeng Zhang, Xiaofeng Chen, Yi Luo, Jun Jiang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
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  4. Engineering highly stable variants of Corynactis californica green fluorescent proteins.Protein science : a publication of the Protein Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Li YangInstitutes of Physical Science and Information Technology, Anhui University, Hefei, Anhui, 230601, P. R. China.
Shifeng NianHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China.
Guozhen ZhangHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China.
Edward SharmanDepartment of Neurology, University of California, Irvine, California, 92697, United States.
Hui MiaoHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China.
Xuepeng ZhangHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China. zhangxp@ustc.edu.cn.
Xiaofeng ChenDepartment of Environmental Science and Engineering, College of Life and Environmental Science, Shanghai Normal University, Shanghai, 200234, China. xiaofengchen@shnu.edu.cn.
Yi LuoHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China.ORCID http://orcid.org/0000-0003-0007-0394
Jun JiangHefei National Laboratory for Physical Sciences at the Microscale, iChEM (Collaborative Innovation Centre of Chemistry for Energy Materials), CAS Centre for Excellence in Nanoscience, Department of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui, 230026, China. jiangj1@ustc.edu.cn.ORCID http://orcid.org/0000-0002-6116-5605
University of Science and Technology of China · CNShanghai Normal University · CNUniversity of California, Irvine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fluorescence emission from green fluorescent protein (GFP) is known to be heavily influenced by hydrogen bonding between the core fluorophore and the surrounding side chains or water molecules. Yet how to utilize this feature for modulating the fluorescence of GFP chromophore or GFP-like fluorophore still remains elusive. Here we present theoretical calculations to predict how hydrogen bonding could influence the excited states of the GFP-like fluorophores. These studies provide both a new perspective for understanding the photophysical properties of GFP as well as a solid basis for the rational design of GFP-based fluorophores.

Indexed as

Models, ChemicalComputational ChemistryFluorescenceFluorescent DyesGreen Fluorescent ProteinsHydrogen BondingSpectrometry, FluorescenceWaterFluorescent DyesGreen Fluorescent ProteinsWater

Identifiers

PMID31406231
PMCPMC6690883
OpenAlexW2969209699

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.