ArticleScientific reports2019
Exploring evolution and diversity of Chinese Dipterocarpaceae using next-generation sequencing.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Complete chloroplast genome of endangered speciesMitochondrial DNA. Part B, Resources · 2024Article
- Genome-wide characterization leading to simple sequence repeat (SSR) markers development in Shorea robusta.Functional & integrative genomics · 2023Article
- Two new Russula species (fungi) from dry dipterocarp forest in Thailand suggest niche specialization to this habitat type.Scientific reports · 2022Article
- Comparative and phylogenetic analyses of eleven complete chloroplast genomes of Dipterocarpoideae.Chinese medicine · 2021Article
- Genomics of the critically endangered monotypic genus Sinopora: the plastome ofMitochondrial DNA. Part B, Resources · 2020Article
- Plastome comparative genomics in maples resolves the infrageneric backbone relationships.PeerJ · 2020Article
- Integrating DNA Barcoding and Traditional Taxonomy for the Identification of Dipterocarps in Remnant Lowland Forests of Sumatra.Plants (Basel, Switzerland) · 2019Article
- Plastome ofPhytoKeys · 2019Article
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Authors and funding
3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Tropical forests, a key-category of land ecosystems, are faced with the world's highest levels of habitat conversion and associated biodiversity loss. In tropical Asia, Dipterocarpaceae are one of the economically and ecologically most important tree families, but their genomic diversity and evolution remain understudied, hampered by a lack of available genetic resources. Southern China represents the northern limit for Dipterocarpaceae, and thus changes in habitat ecology, community composition and adaptability to climatic conditions are of particular interest in this group. Phylogenomics is a tool for exploring both biodiversity and evolutionary relationships through space and time using plastome, nuclear and mitochondrial genome. We generated full plastome and Nuclear Ribosomal Cistron (NRC) data for Chinese Dipterocarpaceae species as a first step to improve our understanding of their ecology and evolutionary relationships. We generated the plastome of Dipterocarpus turbinatus, the species with the widest distribution using it as a baseline for comparisons with other taxa. Results showed low level of genomic diversity among analysed range-edge species, and different evolutionary history of the incongruent NRC and plastome data. Genomic resources provided in this study will serve as a starting point for future studies on conservation and sustainable use of these dominant forest taxa, phylogenomics and evolutionary studies.
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