Evidence map›Paper›PMID 31406208›Full record

ArticleScientific reports2019

Genome-wide Identification, Classification, Expression and Duplication Analysis of GRAS Family Genes in Juglans regia L.

Shaowen Quan, Jianxin Niu, Li Zhou, Hang Xu, Li Ma, Yang Qin

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Genome-Wide Characterization of theLife (Basel, Switzerland) · 2026
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  13. Genome-wide analysis of the GRAS gene family inFrontiers in plant science · 2023
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  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shaowen QuanDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China.
Jianxin NiuDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China. njx105@163.com.
Li ZhouDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China.
Hang XuDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China.
Li MaDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China.
Yang QinDepartment of Horticulture, College of Agriculture, Shihezi University, Shihezi, 832003, Xinjiang, China.
Xinjiang Production and Construction Corps · CNShihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fifty-two GRAS genes are identified in walnut genome. Based on the evolutionary relationship and motif analysis, the walnut GRAS gene family was divided into eight subfamilies, and the sequence features analysis of JrGRAS proteins showed that the JrGRAS protein sequences were both conserved and altered during the evolutionary process. Gene duplication analysis indicated that seven GRAS genes in walnut have orthologous genes in other species, and five of them occurred duplicated events in walnut genome. Expression pattern analysis of the GRAS family genes in walnut showed that two JrGRAS genes (JrCIGRa-b and JrSCL28a) were differentially expressed between flower bud and leaf bud (p < 0.01), and two JrGRAS genes (JrCIGRa-b and JrSCL13b-d) were differentially expressed between the different development stages of flower buds transition (p < 0.01), besides, three hub genes (JrGAIa, JrSCL3f and JrSHRc) were identified by co-expression analysis, which suggested these GRAS genes may play an important role in regulating the development of apical meristem in walnut. This study laid a foundation for further understanding of the function of GRAS family genes in walnut.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGene DuplicationGene Expression ProfilingGenome, PlantJuglansMeristemMultigene FamilyPhylogenyPlant ProteinsTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID31406208
PMCPMC6691012
OpenAlexW2968824314

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.