Evidence map›Paper›PMID 31405916›Full record

ArticleJournal of bacteriology2019

The Vc2 Cyclic di-GMP-Dependent Riboswitch of Vibrio cholerae Regulates Expression of an Upstream Putative Small RNA by Controlling RNA Stability.

Benjamin R Pursley, Nicolas L Fernandez, Geoffrey B Severin, Christopher M Waters

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Sporadic type VI secretion in seventh pandemicMicrobiology (Reading, England) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Benjamin R PursleyDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Nicolas L FernandezDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Geoffrey B SeverinDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Christopher M WatersDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA watersc3@msu.edu.
Michigan State University · US

Funding

From structure to systems: Understanding cyclic di-GMP control of transcriptionR01GM109259 · NIGMS · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2015 to 2019
$2.0M
Molecular mechanisms of adaptive diversity in Burkholderia biofilmsR01GM110444 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI COOPER, VAUGHN · 2015 to 2019
$1.5M
Developing novel technologies to address fundamental questions about second messenger signalingR03AI130554 · NIAID · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2017 to 2018
$144k
NIAID NIH HHS R03 AI130554NIGMS NIH HHS R01 GM109259NIGMS NIH HHS R01 GM110444
6 · The paper itself

Abstract

Cyclic di-GMP (c-di-GMP) is a bacterial second messenger molecule that is important in the biology of

Indexed as

Cyclic GMPGene Expression Regulation, BacterialRiboswitchRNA, BacterialRNA StabilitySecond Messenger SystemsTranscription, GeneticVibrio choleraebis(3',5')-cyclic diguanylic acidCyclic GMPRiboswitchRNA, Bacterialcyclic nucleotidesriboswitchRNA degradationsRNAVc2Vibrio cholerae

Identifiers

PMID31405916
PMCPMC6779461
OpenAlexW2966264624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.