Evidence map›Paper›PMID 31402905›Full record

ArticleFrontiers in microbiology2019

Molecular Evolutionary Analysis of Potato Virus Y Infecting Potato Based on the VPg Gene.

Yanzhi Mao, Xuhong Sun, Jianguo Shen, Fangluan Gao, Guangwei Qiu, Teng Wang, Xianzhou Nie, Wei Zhang, Yanling Gao, Yanju Bai

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Yanzhi MaoHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Xuhong SunHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Jianguo ShenInspection and Quarantine Technology Center, Fujian Exit-Entry, Inspection and Quarantine Bureau, Fuzhou, China.
Fangluan GaoInstitute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, China.
Guangwei QiuHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Teng WangHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Xianzhou NieFredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada.
Wei ZhangHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Yanling GaoHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Yanju BaiHeilongjiang Academy of Agricultural Sciences, Harbin, China.
Heilongjiang Provincial Academy of Agricultural Sciences · CNAgriculture and Agri-Food Canada · CAFujian Agriculture and Forestry University · CNFujian Entry - Exit Inspection and Quarantine Bureau · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Potato virus Y (PVY) is an important plant pathogen infecting solanaceous crops, causing significant losses to global potato and tobacco production. Some aspects of the plant pathology and molecular biology of PVY have been studied intensively, but the evolutionary dynamics of this virus are poorly understood. Here, we performed a comprehensive set of rigorous evolutionary analyses using 177 nucleotide sequences of the viral genome linked protein (VPg) gene, which interacts with the plant eukaryotic translation initiation factor 4E (eIF4E). Our Bayesian analysis reveals that the VPg gene of PVY has been evolving at a rate of 5.60 × 10

Indexed as

Bayesian phylogenetic analysisBayesian tip-association significancepotato virus Yselective constraintviral genome linked protein

Identifiers

PMID31402905
PMCPMC6676787
OpenAlexW2958124936

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.