Evidence map›Paper›PMID 31401965›Full record

ReviewPhilosophical transactions of the Royal Society of London. Series B, Biological sciences2019

Confronting models with data: the challenges of estimating disease spillover.

Paul C Cross, Diann J Prosser, Andrew M Ramey, Ephraim M Hanks, Kim M Pepin

Abstract readReview
In one paragraph

Review in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Are we overestimating risk of enteric pathogen spillover from wild birds to humans?Biological reviews of the Cambridge Philosophical Society · 2020
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  12. A Review of Spatial Causal Inference Methods for Environmental and Epidemiological Applications.International statistical review = Revue internationale de statistique · 2021
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  13. SARS-CoV-2 evolution in animals suggests mechanisms for rapid variant selection.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  14. Understanding the origin of COVID-19 requires to change the paradigm on zoonotic emergence from the spillover to the circulation model.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Paul C CrossU.S. Geological Survey, Northern Rocky Mountain Science Center, 2327 University Way, Suite 2, Bozeman, MT 59715, USA.
Diann J ProsserU.S. Geological Survey, Patuxent Wildlife Research Center, 12100 Beech Forest Drive, Laurel, MD 20708, USA.
Andrew M RameyU.S. Geological Survey, Alaska Science Center, 4210 University Drive, Anchorage, AK 99508, USA.
Ephraim M HanksDepartment of Statistics, Pennsylvania State University, University Park, PA 16802, USA.
Kim M PepinNational Wildlife Research Center, USDA-APHIS, Fort Collins, CO 80526, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For pathogens known to transmit across host species, strategic investment in disease control requires knowledge about where and when spillover transmission is likely. One approach to estimating spillover is to directly correlate observed spillover events with covariates. An alternative is to mechanistically combine information on host density, distribution and pathogen prevalence to predict where and when spillover events are expected to occur. We use several case studies at the wildlife-livestock disease interface to highlight the challenges, and potential solutions, to estimating spatio-temporal variation in spillover risk. Datasets on multiple host species often do not align in space, time or resolution, and may have no estimates of observation error. Linking these datasets requires they be related to a common spatial and temporal resolution and appropriately propagating errors in predictions can be difficult. Hierarchical models are one potential solution, but for fine-resolution predictions at broad spatial scales, many models become computationally challenging. Despite these limitations, the confrontation of mechanistic predictions with observed events is an important avenue for developing a better understanding of pathogen spillover. Systems where data have been collected at all levels in the spillover process are rare, or non-existent, and require investment and sustained effort across disciplines. This article is part of the theme issue 'Dynamic and integrative approaches to understanding pathogen spillover'.

Indexed as

AnimalsAnimals, WildLivestockModels, BiologicalModels, TheoreticalZoonosesemerging diseaselivestocktransmissionwildlife

Identifiers

PMID31401965
PMCPMC6711303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.