Evidence map›Paper›PMID 31401766›Full record

ArticleInternational journal of hematology2019

Study of pathophysiology and molecular characterization of congenital anemia in India using targeted next-generation sequencing approach.

Prabhakar S Kedar, Hideo Harigae, Etsuro Ito, Hideki Muramatsu, Seiji Kojima, Yusuke Okuno, Tohru Fujiwara, Rashmi Dongerdiye, Prashant P Warang, Manisha R Madkaikar

Abstract read
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Article in International journal of hematology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  8. An Analysis of Maternal, Social and Household Factors Associated with Childhood Anemia.International journal of environmental research and public health · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Prabhakar S KedarDepartment of Hematogenetics, ICMR-National Institute of Immunohematology, 13th Floor, NMS Building, KEM Hospital Campus, Parel, Mumbai, Maharashtra, 400012, India. kedarps2002@yahoo.com.ORCID http://orcid.org/0000-0003-3509-2913
Hideo HarigaeDepartment of Hematology and Rheumatology, Tohoku University Graduate School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, 980-8574, Japan.
Etsuro ItoDepartment of Pediatrics, Hirosaki University Graduate School of Medicine, Zaifu-cho 5, Hirosaki, 036-8562, Aomori, Japan.
Hideki MuramatsuDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Seiji KojimaDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Yusuke OkunoDepartment of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Tohru FujiwaraDepartment of Hematology and Rheumatology, Tohoku University Graduate School of Medicine, 1-1 Seiryo-machi, Aoba-ku, Sendai, 980-8574, Japan.
Rashmi DongerdiyeDepartment of Hematogenetics, ICMR-National Institute of Immunohematology, 13th Floor, NMS Building, KEM Hospital Campus, Parel, Mumbai, Maharashtra, 400012, India.
Prashant P WarangDepartment of Hematogenetics, ICMR-National Institute of Immunohematology, 13th Floor, NMS Building, KEM Hospital Campus, Parel, Mumbai, Maharashtra, 400012, India.
Manisha R MadkaikarDepartment of Hematogenetics, ICMR-National Institute of Immunohematology, 13th Floor, NMS Building, KEM Hospital Campus, Parel, Mumbai, Maharashtra, 400012, India.
ICMR - National Institute of Immunohaemotology · INNagoya University · JPTohoku University · JPHirosaki University · JP

Funding

Department of Science and Technology (DST) Govt. of India DST/INT/ JSPS/P-225/2016Japan Society of Promotion of Science (JSPS) Tokyo Japan DST/INT/ JSPS/P-225/2016
6 · The paper itself

Abstract

Most patients with anemia are diagnosed through clinical phenotype and basic laboratory testing. Nonetheless, in cases of rare congenital anemias, some patients remain undiagnosed despite undergoing an exhaustive workup. Genetic testing is complicated by the large number of genes that are involved in rare anemias, due to similarities in the clinical presentation. We sought to enhance the diagnosis of patients with congenital anemias by using targeted next-generation sequencing. The genetic diagnosis was performed by gene capture followed by next-generation sequencing of 76 genes known to cause anemia syndromes. Genetic diagnosis was achieved in 17 of 21 transfusion-dependent patients and undiagnosed by conventional workup. Four cases were diagnosed with red cell membrane protein defects, four patients were diagnosed with pyruvate kinase deficiency, one case of adenylate kinase deficiency, one case of glucose phosphate isomerase deficiency, one case of hereditary xerocytosis, three cases having combined membrane and enzyme defect, two cases with Diamond-Blackfan anemia (DBA) and 1 with CDA type II with 26 different mutations, of which 21 are novel. Earlier incorporation of this NGS method into the workup of patients with congenital anemia may improve patient care and enable genetic counselling.

Indexed as

MutationAdenylate KinaseAnemiaAnemia, Diamond-BlackfanAnemia, Hemolytic, CongenitalAnemia, Hemolytic, Congenital NonspherocyticCytokinesGenetic TestingGlucose-6-Phosphate IsomeraseHigh-Throughput Nucleotide SequencingHumansHydrops FetalisIndiaPyruvate KinasePyruvate Metabolism, Inborn ErrorsAdenylate KinaseCytokinesGlucose-6-Phosphate IsomeraseGPI protein, humanPyruvate KinaseCongenital anemiaErythroenzymopathiesIndiaMembranopathiesMolecular geneticsNext-generation sequencing

Identifiers

PMID31401766
OpenAlexW2967616186

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.