Evidence map›Paper›PMID 31399934›Full record

ArticlePlant molecular biology2019

Proteomic characterization of MPK4 signaling network and putative substrates.

Tong Zhang, Shweta Chhajed, Jacqueline D Schneider, Guanqiao Feng, Wen-Yuan Song, Sixue Chen

Abstract read
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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Mitogen-Activated Protein Kinase 4-Regulated Metabolic Networks.International journal of molecular sciences · 2022
    Article
  2. Article
  3. HopA1 Effector fromInternational journal of molecular sciences · 2021
    Article
  4. Proteomics of Homeobox7 Enhanced Salt Tolerance inInternational journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tong ZhangDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Shweta ChhajedDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Jacqueline D SchneiderDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA.
Guanqiao FengPlant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, 32610, USA.
Wen-Yuan SongPlant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, 32610, USA.
Sixue ChenDepartment of Biology, University of Florida, Gainesville, FL, 32611, USA. schen@ufl.edu.ORCID http://orcid.org/0000-0002-6690-7612
University of Florida · USPacific Northwest National Laboratory · US

Funding

Division of Molecular and Cellular Biosciences 0818051Division of Molecular and Cellular Biosciences 1412547
6 · The paper itself

Abstract

key messageCombining genetic engineering of MPK4 activity and quantitative proteomics, we established an in planta system that enables rapid study of MPK4 signaling networks and potential substrate proteins. Mitogen activated protein kinase 4 (MPK4) is a multifunctional kinase that regulates various signaling events in plant defense, growth, light response and cytokinesis. The question of how a single protein modulates many distinct processes has spurred extensive research into the physiological outcomes resulting from genetic perturbation of MPK4. However, the mechanism by which MPK4 functions is still poorly understood due to limited data on the MPK4 networks including substrate proteins and downstream pathways. Here we introduce an experimental system that combines genetic engineering of kinase activity and quantitative proteomics to rapidly study the signaling networks of MPK4. First, we transiently expressed a constitutively active (MPK4

Indexed as

Gene Expression Regulation, PlantProteomicsArabidopsisArabidopsis ProteinsBrassica napusGenetic EngineeringMAP Kinase Signaling SystemMitogen-Activated Protein KinasesNicotianaPhosphorylationPlant ImmunityPlant LeavesProteomeSignal TransductionArabidopsis ProteinsMitogen-Activated Protein KinasesProteomeKinase networkMPK4PhosphoproteomicsProteomicsSubstrate

Identifiers

PMID31399934
OpenAlexW2969104211

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.