ArticleNature biotechnology2019
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.
Registry-linked trialAbstract readPublished Erratum
In one paragraph
Article in Nature biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04781036 (The Study of Foot-skin Microbiome and Metabolomics of Thai Naval Cadets With Pitted Keratolysis), which is not on this map. Cited by 242 papers.
0numbers the graph read from it
0cells of the map it votes in
242citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
The Study of Foot-skin Microbiome and Metabolomics of Thai Naval Cadets With Pitted Keratolysis
Who cites it
242 citing papers in PubMed.
- Bifidobacterium longum BB536 is associated with improvements in gastrointestinal symptoms and odor-related metabolites in microbiota-defined subgroups of male athletes consuming a high-protein diet: exploratory randomized double‑blind placebo‑controlled trial.Journal of the International Society of Sports Nutrition · 2026Trial
- Trial
- The spleen-strengthening and liver-draining herbal formula treatment of non-alcoholic fatty liver disease by regulation of intestinal flora in clinical trial.Frontiers in endocrinology · 2022Trial
- IgA deficiency reveals a microbiota-dependent pathway to gluten sensitivity.Gut microbes · 2026Article
- Evaluation of aFood chemistry: X · 2026Article
- Deciphering the Link Between Gut Bacterial Community Structure of Forest Musk Deer (Veterinary sciences · 2026Article
- Integrating multi-omics technologies to decipher microbiome functions.Nature communications · 2026Review
- Effects of Growth Stage and Physiological State on Gut Health, Antioxidant Capacity, and Muscle Nutritional Composition in Greenhouse-CulturedAntioxidants (Basel, Switzerland) · 2026Article
- A SHIMEAntioxidants (Basel, Switzerland) · 2026Article
- Context-dependent effects of antimicrobial coatings on microbial load and bacterial community composition on public high-touch surfaces.Microbiome · 2026Article
- Effects of copper and cadmium stress on resistance genes in farmland soil.BMC microbiology · 2026Article
- Article
- Microencapsulation alters pyraclostrobin degradation and reshapes soil microbial communities compared to conventional formulations.Journal of advanced research · 2026Article
- Influence of ginger root extract supplementation on the microbiota-gut-brain axis in individuals with sciatica: Study protocol for a double-blind, placebo-controlled randomized trial.Clinical nutrition ESPEN · 2026Article
- Multi-Omic Profiling of Gut Microbiota and Fecal Metabolites in Patients With Polycystic Ovary Syndrome: A Cross-Sectional Study.Health science reports · 2026Article
- Berberine alleviates radiation-induced intestinal injury by inhibiting cellular senescence.Radiation oncology (London, England) · 2026Article
- Probiotics mitigate non-antibiotic drug-induced dysbiosis via protein homology-driven competitive binding.Nature communications · 2026Article
- Thyroid functional state-dependent dysbiosis of gut microbiota in Hashimoto's thyroiditis: a cross-sectional metagenomic profiling study.Thyroid research · 2026Article
- IGFBP3 repression driven by inflammation links air pollution to placental and developmental defects.EMBO molecular medicine · 2026Article
- Bacterial taxa associated with lung cancer cases in Southeast Asians: a pilot case-control study.Cellular oncology (Dordrecht, Netherlands) · 2026Article
182 more citing papers are in PubMed but not listed here.
Corrections and comments
- Erratum for
Authors and funding
112 authors.
Evan Bolyen *Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0002-5362-6782
Jai Ram Rideout *Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0003-2587-1454
Matthew R Dillon *Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0002-7713-1952
Nicholas A Bokulich *Center for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0002-1784-8935
Christian C AbnetMetabolic Epidemiology Branch, National Cancer Institute, Rockville, MD, USA.ORCID http://orcid.org/0000-0002-3008-7843
Gabriel A Al-GhalithDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA.ORCID http://orcid.org/0000-0002-6953-6319
Harriet AlexanderBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Eric J AlmDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-8294-9364
Manimozhiyan ArumugamNovo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-0886-9101
Francesco AsnicarCentre for Integrative Biology, University of Trento, Trento, Italy.ORCID http://orcid.org/0000-0003-3732-1468
Yang BaiState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-2652-7022
Jordan E BisanzDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-8649-1706
Kyle BittingerDivision of Gastroenterology and Nutrition, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Asker BrejnrodNovo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Colin J BrislawnEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, USA.
C Titus BrownDepartment of Population Health and Reproduction, University of California, Davis, Davis, CA, USA.ORCID http://orcid.org/0000-0001-6001-2677
Benjamin J CallahanDepartment of Population Health & Pathobiology, North Carolina State University, Raleigh, NC, USA.ORCID http://orcid.org/0000-0002-8752-117X
Andrés Mauricio Caraballo-RodríguezCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0001-5499-2728
John ChaseCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Emily K CopeCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Ricardo Da SilvaCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Christian DienerInstitute for Systems Biology, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-7476-0868
Pieter C DorresteinCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-3003-1030
Gavin M DouglasDepartment of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia, Canada.
Daniel M DurallIrving K. Barber School of Arts and Sciences, University of British Columbia, Kelowna, British Columbia, Canada.ORCID http://orcid.org/0000-0001-7414-4443
Claire DuvalletDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-8093-8394
Christian F EdwardsonA. Watson Armour III Center for Animal Health and Welfare, Aquarium Microbiome Project, John G. Shedd Aquarium, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-7524-7209
Madeleine ErnstCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Mehrbod EstakiDepartment of Biology, University of British Columbia Okanagan, Okanagan, British Columbia, Canada.
Jennifer FouquierComputational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID http://orcid.org/0000-0002-0975-8235
Julia M GauglitzCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Sean M GibbonsInstitute for Systems Biology, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-8724-7916
Deanna L GibsonIrving K. Barber School of Arts and Sciences, Department of Biology, University of British Columbia, Kelowna, British Columbia, Canada.
Antonio GonzalezDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Kestrel GorlickCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Jiarong GuoCenter for Microbial Ecology, Michigan State University, East Lansing, MI, USA.
Benjamin HillmannDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA.
Susan HolmesStatistics Department, Stanford University, Palo Alto, CA, USA.ORCID http://orcid.org/0000-0002-2208-8168
Hannes HolsteDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-7739-6590
Curtis HuttenhowerDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.ORCID http://orcid.org/0000-0002-1110-0096
Gavin A HuttleyResearch School of Biology, The Australian National University, Canberra, Australian Capital Territory, Australia.
Stefan JanssenDepartment of Pediatric Oncology, Hematology and Clinical Immunology, Heinrich-Heine University Dusseldorf, Dusseldorf, Germany.ORCID http://orcid.org/0000-0003-0955-0589
Alan K JarmuschCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Lingjing JiangDepartment of Family Medicine and Public Health, University of California San Diego, La Jolla, CA, USA.
Benjamin D KaehlerResearch School of Biology, The Australian National University, Canberra, Australian Capital Territory, Australia.
Kyo Bin KangCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0003-3290-1017
Christopher R KeefeCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0002-4289-0991
Paul KeimCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Scott T KelleyDepartment of Biology, San Diego State University, San Diego, CA, USA.
Dan KnightsDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA.
Irina KoesterCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Tomasz KosciolekDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA.ORCID http://orcid.org/0000-0002-9915-7387
Jorden KrepsCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0003-3758-6458
Morgan G I LangilleDepartment of Pharmacology, Dalhousie University, Halifax, Nova Scotia, Canada.
Joslynn LeeScience Education, Howard Hughes Medical Institute, Ashburn, VA, USA.
Ruth LeyDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Yong-Xin LiuState Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-1832-9835
Erikka LoftfieldMetabolic Epidemiology Branch, National Cancer Institute, Rockville, MD, USA.ORCID http://orcid.org/0000-0002-3573-8748
Catherine LozuponeDepartment of Medicine, Division of Biomedical Informatics and Personalized Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.ORCID http://orcid.org/0000-0003-4786-7202
Massoud MaherDepartment of Computer Science & Engineering, University of California San Diego, La Jolla, CA, USA.
Clarisse MarotzDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-1520-8854
Bryan D MartinDepartment of Statistics, University of Washington, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-8002-5296
Daniel McDonaldDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-0876-9060
Lauren J McIverDepartment of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Alexey V MelnikCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-4645-8880
Jessica L MetcalfDepartment of Animal Science, Colorado State University, Fort Collins, CO, USA.
Sydney C MorganIrving K. Barber School of Arts and Sciences, Unit 2 (Biology), University of British Columbia, Kelowna, British Columbia, Canada.
Jamie T MortonDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Ahmad Turan NaimeyCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Jose A Navas-MolinaDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-4595-920X
Louis Felix NothiasCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Stephanie B OrchanianCenter for Microbiome Innovation, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-2491-1074
Talima PearsonCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.ORCID http://orcid.org/0000-0003-3696-041X
Samuel L PeoplesSchool of Information Studies, Syracuse University, Syracuse, NY, USA.
Daniel PetrasCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-6561-3022
Mary Lai PreussDepartment of Biological Sciences, Webster University, St. Louis, MO, USA.
Elmar PruesseDepartment of Medicine, Division of Biomedical Informatics and Personalized Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Lasse Buur RasmussenNovo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Adam RiversAgricultural Research Service, Genomics and Bioinformatics Research Unit, United States Department of Agriculture, Gainesville, FL, USA.ORCID http://orcid.org/0000-0002-3703-834X
Michael S RobesonCollege of Medicine, Department of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.ORCID http://orcid.org/0000-0001-7119-6301
Patrick RosenthalDepartment of Biological Sciences, Webster University, St. Louis, MO, USA.
Nicola SegataCentre for Integrative Biology, University of Trento, Trento, Italy.ORCID http://orcid.org/0000-0002-1583-5794
Michael ShafferComputational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Arron ShifferCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Rashmi SinhaMetabolic Epidemiology Branch, National Cancer Institute, Rockville, MD, USA.
Se Jin SongDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-0750-5709
John R SpearDepartment of Civil and Environmental Engineering, Colorado School of Mines, Golden, CO, USA.
Austin D SwaffordCenter for Microbiome Innovation, University of California San Diego, La Jolla, CA, USA.
Luke R ThompsonDepartment of Biological Sciences and Northern Gulf Institute, University of Southern Mississippi, Hattiesburg, MS, USA.ORCID http://orcid.org/0000-0002-3911-1280
Pedro J TorresDepartment of Biology, San Diego State University, San Diego, CA, USA.
Pauline TrinhDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, WA, USA.
Anupriya TripathiCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Peter J TurnbaughDepartment of Microbiology and Immunology, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-0888-2875
Sabah Ul-HasanQuantitative and Systems Biology Graduate Program, University of California Merced, Merced, CA, USA.
Justin J J van der HooftBioinformatics Group, Wageningen University, Wageningen, the Netherlands.ORCID http://orcid.org/0000-0002-9340-5511
Fernando VargasDivision of Biological Sciences, University of California San Diego, San Diego, CA, USA.
Yoshiki Vázquez-BaezaDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Emily VogtmannMetabolic Epidemiology Branch, National Cancer Institute, Rockville, MD, USA.ORCID http://orcid.org/0000-0003-1355-5593
Max von HippelDepartment of Mathematics, University of Arizona, Tucson, AZ, USA.ORCID http://orcid.org/0000-0003-0288-5802
William WaltersDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Yunhu WanMetabolic Epidemiology Branch, National Cancer Institute, Rockville, MD, USA.
Mingxun WangCollaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.
Jonathan WarrenNational Laboratory Service, Environment Agency, Starcross, UK.ORCID http://orcid.org/0000-0003-3381-3852
Kyle C WeberAgricultural Research Service, Genomics and Bioinformatics Research Unit, United States Department of Agriculture, Gainesville, FL, USA.
Charles H D WilliamsonPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
Amy D WillisDepartment of Biostatistics, University of Washington, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-2802-4317
Zhenjiang Zech XuDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Jesse R ZaneveldSchool of STEM, Division of Biological Sciences, University of Washington Bothell, Bothell, WA, USA.
Yilong ZhangMerck & Co. Inc., Kenilworth, NJ, USA.
Qiyun ZhuDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-3568-6271
Rob KnightDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-0975-9019
J Gregory CaporasoCenter for Applied Microbiome Science, Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA. greg.caporaso@nau.edu.ORCID http://orcid.org/0000-0002-8865-1670
Funding
Biostatistics, Epidemiologic & Bioinformatic Training in Environmental HealthT32ES015459 · NIEHS · UNIVERSITY OF WASHINGTON · PI June T. Spector · 2009 to 2026
$10.6MAbstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
Identifiers
PMID
31399723What OpenQuestion holds
Textmetadata
Read underepoch 390
Registered trials
NCT04781036ClinicalTrials.gov
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.