Evidence map›Paper›PMID 31396512›Full record

ArticleFrontiers in cell and developmental biology2019

Single Cell Imaging of Nuclear Architecture Changes.

Rikke Brandstrup Morrish, Michael Hermes, Jeremy Metz, Nicholas Stone, Stefano Pagliara, Richard Chahwan, Francesca Palombo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

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  10. Sodium Valproate-Induced Chromatin Remodeling.Frontiers in cell and developmental biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Rikke Brandstrup MorrishSchool of Physics and Astronomy, University of Exeter, Exeter, United Kingdom.
Michael HermesSchool of Physics and Astronomy, University of Exeter, Exeter, United Kingdom.
Jeremy MetzLiving Systems Institute and School of Biosciences, University of Exeter, Exeter, United Kingdom.
Nicholas StoneSchool of Physics and Astronomy, University of Exeter, Exeter, United Kingdom.
Stefano PagliaraLiving Systems Institute and School of Biosciences, University of Exeter, Exeter, United Kingdom.
Richard ChahwanInstitute of Experimental Immunology, University of Zurich, Zurich, Switzerland.
Francesca PalomboSchool of Physics and Astronomy, University of Exeter, Exeter, United Kingdom.
University of Exeter · GBUniversity of Zurich · CH

Funding

Medical Research Council MC_PC_15054
6 · The paper itself

Abstract

The dynamic architecture of chromatin, the macromolecular complex comprised primarily of DNA and histones, is vital for eukaryotic cell growth. Chemical and conformational changes to chromatin are important markers of functional and developmental processes in cells. However, chromatin architecture regulation has not yet been fully elucidated. Therefore, novel approaches to assessing chromatin changes at the single-cell level are required. Here we report the use of FTIR imaging and microfluidic cell-stretcher chips to assess changes to chromatin architecture and its effect on the mechanical properties of the nucleus in immune cells. FTIR imaging enables label-free chemical imaging with subcellular resolution. By optimizing the FTIR methodology and coupling it with cell segmentation analysis approach, we have identified key spectral changes corresponding to changes in DNA levels and chromatin conformation at the single cell level. By further manipulating live single cells using pressure-driven microfluidics, we found that chromatin decondensation - either during general transcriptional activation or during specific immune cell maturation - can ultimately lead to nuclear auxeticity which is a new biological phenomenon recently identified. Taken together our findings demonstrate the tight and, potentially bilateral, link between extra-cellular mechanotransduction and intra-cellular nuclear architecture.

Indexed as

auxeticityB cellchromatininfrared microscopymicrofluidicsnuclear architecture

Identifiers

PMID31396512
PMCPMC6668442
OpenAlexW2958458839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.