ArticleFrontiers in plant science2019
A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens.
Article in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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Who cites it
36 citing papers in PubMed.
- Unravelling Complex Hybrid and Polyploid Evolutionary Relationships Using Phylogenetic Placement of Homologous Gene Copies from Target Enrichment Data.Systematic biology · 2026Article
- A phylogenetic approach to prioritizing crop wild relatives in Brassiceae (Brassicaceae) for breeding applications.Annals of botany · 2026Article
- Genomic elucidation of hybridization between Liberica and excelsa coffee and its implications for coffee crop development.Scientific reports · 2026Article
- Patterns of Interploidy Admixture in Polyploid Complexes: Insights From Thymus Sect. Mastichina (Lamiaceae).Molecular ecology · 2026Article
- Spatial ploidy inference using quantitative imaging.Cell reports methods · 2025Article
- Genomic data define species delimitation in Liberica coffee with implications for crop development and conservation.Nature plants · 2025Article
- No Mate, No Problem: Molecular Mechanisms Involved in Parthenogenesis in the Cosmopolitan Earthworm Aporrectodea trapezoides (Annelida, Clitellata).Molecular ecology · 2025Article
- Conservation Implications for the Iberian Narrow EndemicEcology and evolution · 2025Article
- Phylogenetic relationships and the identification of allopolyploidy in circumpolar Silene sect. Physolychnis.American journal of botany · 2025Article
- Harnessing Genomics for BreedingInternational journal of molecular sciences · 2025Article
- Polyploidy linked with species richness but not diversification rates or niche breadth in Australian Pomaderreae (Rhamnaceae).Annals of botany · 2025Article
- Range extension and re-assessment ofBiodiversity data journal · 2025Article
- Ancient polyploidization events influence the evolution of the ginseng family (Araliaceae).Frontiers in plant science · 2025Article
- Retrieval of long DNA reads from herbarium specimens.AoB PLANTS · 2023Review
- Strategies of diaspore dispersal investment in Compositae: the case of the Andean highlands.Annals of botany · 2023Article
- Ploidy variation inAoB PLANTS · 2023Article
- Genomic, spatial and morphometric data for discrimination of four species in the Mediterranean Tamus clade of yams (Dioscorea, Dioscoreaceae).Annals of botany · 2023Article
- Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis.BMC genomics · 2023Article
- The evolution of the hypotetraploidFrontiers in plant science · 2023Article
- A Bioinformatic Pipeline to Estimate Ploidy Level from Target Capture Sequence Data Obtained from Herbarium Specimens.Methods in molecular biology (Clifton, N.J.) · 2023Article
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Whole genome duplication (WGD) events are common in many plant lineages, but the ploidy status and possible occurrence of intraspecific ploidy variation are unknown for most species. Standard methods for ploidy determination are chromosome counting and flow cytometry approaches. While flow cytometry approaches typically use fresh tissue, an increasing number of studies have shown that recently dried specimens can be used to yield ploidy data. Recent studies have started to explore whether high-throughput sequencing (HTS) data can be used to assess ploidy levels by analyzing allelic frequencies from single copy nuclear genes. Here, we compare different approaches using a range of yam (
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