Evidence map›Paper›PMID 31395899›Full record

ArticleScientific reports2019

ANO5 mutations in the Polish limb girdle muscular dystrophy patients: Effects on the protein structure.

Adam Jarmula, Anna Łusakowska, Jakub P Fichna, Malgorzata Topolewska, Anna Macias, Katherine Johnson, Ana Töpf, Volker Straub, Edyta Rosiak, Krzysztof Szczepaniak and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Sex differences in the involvement of skeletal and cardiac muscles in myopathicAmerican journal of physiology. Cell physiology · 2022
    Pooled it
  2. Article
  3. Observational
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Panorama of the distal myopathies.Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Adam JarmulaLaboratory of Bioinformatics, Nencki Institute of Experimental Biology, Polish Academy of Academy of Sciences, 3 Pasteur St., 02-093, Warsaw, Poland.ORCID http://orcid.org/0000-0001-6485-8231
Anna ŁusakowskaDepartment of Neurology, Medical University of Warsaw, 1a Banacha St., 02-097, Warsaw, Poland.
Jakub P FichnaDepartment of Neurodegenerative Disorders, Mossakowski Medical Research Centre, Polish Academy of Sciences, 5 Pawinskiego St., 02-106, Warsaw, Poland.
Malgorzata TopolewskaLaboratory of Molecular Basis of Cell Motility, Nencki Institute of Experimental Biology, Polish Academy of Sciences, 3 Pasteur St., 02-093, Warsaw, Poland.
Anna MaciasDepartment of Neurology, Medical University of Warsaw, 1a Banacha St., 02-097, Warsaw, Poland.
Katherine JohnsonJohn Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, United Kingdom.
Ana TöpfJohn Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, United Kingdom.
Volker StraubJohn Walton Muscular Dystrophy Research Centre, Institute of Genetic Medicine, Newcastle University, Newcastle-upon-Tyne, United Kingdom.
Edyta Rosiak2nd Department of Radiology, Medical University of Warsaw, 1a Banacha St., 02-097, Warsaw, Poland.ORCID http://orcid.org/0000-0001-7396-7456
Krzysztof SzczepaniakLaboratory of Structural Bioinformatics, Centre of New Technologies, University of Warsaw, 2c Banacha St., 02-097, Warsaw, Poland.
Stanisław Dunin-HorkawiczLaboratory of Structural Bioinformatics, Centre of New Technologies, University of Warsaw, 2c Banacha St., 02-097, Warsaw, Poland.
Aleksandra MaruszakDepartment of Neurodegenerative Disorders, Mossakowski Medical Research Centre, Polish Academy of Sciences, 5 Pawinskiego St., 02-106, Warsaw, Poland.
Anna M KaminskaDepartment of Neurology, Medical University of Warsaw, 1a Banacha St., 02-097, Warsaw, Poland.
Maria Jolanta RedowiczLaboratory of Molecular Basis of Cell Motility, Nencki Institute of Experimental Biology, Polish Academy of Sciences, 3 Pasteur St., 02-093, Warsaw, Poland. j.redowicz@nencki.gov.pl.
Medical University of Warsaw · PLInstytut Biologii Doświadczalnej im. Marcelego Nenckiego · PLMuscular Dystrophy UK · GBMossakowski Medical Research Institute, Polish Academy of Sciences · PLUniversity of Warsaw · PL

Funding

Joint Center for Mendelian GenomicsUM1HG008900 · NHGRI · BROAD INSTITUTE, INC. · PI O'DONNELL-LURIA, ANNE, REHM, HEIDI L · 2016 to 2020
$16.5M
NHGRI NIH HHS UM1 HG008900
6 · The paper itself

Abstract

LGMD2L is a subtype of limb-girdle muscular dystrophy (LGMD), caused by recessive mutations in ANO5, encoding anoctamin-5 (ANO5). We present the analysis of five patients with skeletal muscle weakness for whom heterozygous mutations within ANO5 were identified by whole exome sequencing (WES). Patients varied in the age of the disease onset (from 22 to 38 years) and severity of the morphological and clinical phenotypes. Out of the nine detected mutations one was novel (missense p.Lys132Met, accompanied by p.His841Asp) and one was not yet characterized in the literature (nonsense, p.Trp401Ter, accompanied by p.Asp81Gly). The p.Asp81Gly mutation was also identified in another patient carrying a p.Arg758Cys mutation as well. Also, a c.191dupA frameshift (p.Asn64LysfsTer15), the first described and common mutation was identified. Mutations were predicted by in silico tools to have damaging effects and are likely pathogenic according to criteria of the American College of Medical Genetics and Genomics (ACMG). Indeed, molecular modeling of mutations revealed substantial changes in ANO5 conformation that could affect the protein structure and function. In addition, variants in other genes associated with muscle pathology were identified, possibly affecting the disease progress. The presented data indicate that the identified ANO5 mutations contribute to the observed muscle pathology and broaden the genetic spectrum of LGMD myopathies.

Indexed as

Genetic Predisposition to DiseaseAdultAnoctaminsChloride ChannelsComputational BiologyFemaleHeterozygoteHumansMaleMuscle, SkeletalMuscular Dystrophies, Limb-GirdleMutationPhenotypePolandYoung AdultANO5 protein, humanAnoctaminsChloride Channels

Identifiers

PMID31395899
PMCPMC6687736
OpenAlexW2968578953

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.