Evidence map›Paper›PMID 31394099›Full record

ArticleBiochimica et biophysica acta. Biomembranes2020

Occupancy distributions of membrane proteins in heterogeneous liposome populations.

Lucy Cliff, Rahul Chadda, Janice L Robertson

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Biomembranes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Dimerization mechanism of an inverted-topology ion channel in membranes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. A thermodynamic analysis of CLC transporter dimerization in lipid bilayers.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Lucy CliffDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, United States of America; Department of Chemistry, The University of Bath, Bath, England, UK.
Rahul ChaddaDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, United States of America; Department of Biochemistry and Molecular Biophysics, Washington University, St. Louis, MO, United States of America.
Janice L RobertsonDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, United States of America; Department of Biochemistry and Molecular Biophysics, Washington University, St. Louis, MO, United States of America. Electronic address: janice.robertson@wustl.edu.
University of Iowa · US

Funding

Driving forces of membrane protein assembly in membranesR01GM120260 · NIGMS · WASHINGTON UNIVERSITY · PI ROBERTSON, JANICE L · 2016 to 2024
$3.4M
Debugging eukaryotic membrane protein expression in E. coli using single-molecule fluorescence microscopyR21GM126476 · NIGMS · WASHINGTON UNIVERSITY · PI ROBERTSON, JANICE L · 2018 to 2019
$427k
NIGMS NIH HHS R01 GM120260NIGMS NIH HHS R21 GM126476
6 · The paper itself

Abstract

Studies of membrane protein structure and function often rely on reconstituting the protein into lipid bilayers through the formation of liposomes. Many measurements conducted in proteoliposomes, e.g. transport rates, single-molecule dynamics, monomer-oligomer equilibrium, require some understanding of the occupancy statistics of the liposome population for correct interpretation of the results. In homogenous liposomes, this is easy to calculate as the act of protein incorporation can be described by the Poisson distribution. However, in reality, liposomes are heterogeneous, which alters the statistics of occupancy in several ways. Here, we determine the liposome occupancy distribution for membrane protein reconstitution while considering liposome size heterogeneity. We calculate the protein occupancy for a homogenous population of liposomes with radius r = 200 nm, representing an idealization of vesicles extruded through 400 nm pores and compare it to the right-skewed distribution of 400 nm 2:1 POPE:POPG vesicles. As is the case for E. coli polar lipids, this synthetic composition yields a sub-population of small liposomes, 25-30 nm in radius with a long tail of larger vesicles. Previously published microscopy data of the co-localization of the CLC-ec1 Cl

Indexed as

Statistical DistributionsCryoelectron MicroscopyLiposomesMembrane ProteinsParticle SizeLiposomesMembrane ProteinsCLC-ec1Liposome size distributionMembrane proteinPoissonReconstitutionSingle-molecule photobleaching

Identifiers

PMID31394099
PMCPMC6899186
OpenAlexW2964442690

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.