Evidence map›Paper›PMID 31393667›Full record

ArticleEnvironmental microbiology reports2019

Altitude and fungal diversity influence the structure of Antarctic cryptoendolithic Bacteria communities.

Claudia Coleine, Jason E Stajich, Nuttapon Pombubpa, Laura Zucconi, Silvano Onofri, Fabiana Canini, Laura Selbmann

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Novel endolithic bacteria of phylumApplied and environmental microbiology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Antarctica as a reservoir of planetary analogue environments.Extremophiles : life under extreme conditions · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Claudia ColeineDepartment of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.
Jason E StajichDepartment of Microbiology and Plant Pathology and Institute of Integrative Genome Biology, University of California, Riverside, CA, USA.ORCID 0000-0002-7591-0020
Nuttapon PombubpaDepartment of Microbiology and Plant Pathology and Institute of Integrative Genome Biology, University of California, Riverside, CA, USA.
Laura ZucconiDepartment of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.
Silvano OnofriDepartment of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.ORCID 0000-0001-8872-1440
Fabiana CaniniDepartment of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.
Laura SelbmannDepartment of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.

Funding

Acquisition of a Scalable Storage Cluster for Data Intensive NIH ResearchS10OD016290 · OD · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI GIRKE, THOMAS · 2014 to 2014
$593k
Alfred P. Sloan Foundation Built Environment ProgramNational Institute of Food and Agriculture Hatch Project CA-R-PPA-5062-HNational Institutes of Health (NIH) S10-OD016290National Science Foundation (NSF) DBI-1429826NIH HHS S10 OD016290United States Department of AgricultureUniversity of California-Riverside
6 · The paper itself

Abstract

Endolithic growth within rocks is a critical adaptation of microbes living in harsh environments where exposure to extreme temperature, radiation, and desiccation limits the predominant life forms, such as in the ice-free regions of Continental Antarctica. The microbial diversity of the endolithic communities in these areas has been sparsely examined. In this work, diversity and composition of bacterial assemblages in the cryptoendolithic lichen-dominated communities of Victoria Land (Continental Antarctica) were explored using a high-throughput metabarcoding approach, targeting the V4 region of 16S rDNA. Rocks were collected in 12 different localities (from 14 different sites), along a gradient ranging from 1000 to 3300 m a.s.l. and at a sea distance ranging from 29 to 96 km. The results indicate Actinobacteria and Proteobacteria are the dominant taxa in all samples and defined a 'core' group of bacterial taxa across all sites. The structure of bacteria communities is correlated with the fungal counterpart and among the environmental parameters considered, altitude was found to influence bacterial biodiversity, while distance from sea had no evident influence.

Indexed as

AltitudeBiodiversityMicrobiotaAntarctic RegionsBacteriaDNA, BacterialFungiGenetic VariationPhylogenySequence Analysis, DNASoil MicrobiologyDNA, Bacterial

Identifiers

PMID31393667
PMCPMC8057506

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.