Evidence map›Paper›PMID 31392978›Full record

ArticleNucleic acids research2019

The general mRNA exporters Mex67 and Mtr2 play distinct roles in nuclear export of tRNAs in Trypanosoma brucei.

Eva Hegedűsová, Sneha Kulkarni, Brandon Burgman, Juan D Alfonzo, Zdeněk Paris

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  7. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Eva HegedűsováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Sneha KulkarniInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Brandon BurgmanInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Juan D AlfonzoDepartment of Microbiology, Ohio State Biochemistry Program and The Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA.
Zdeněk ParisInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice, Czech Republic.
Institute of Parasitology · CZCzech Academy of Sciences, Biology Centre · CZThe Ohio State University · USUniversity of South Bohemia in České Budějovice · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transfer RNAs (tRNAs) are central players in protein synthesis, which in Eukarya need to be delivered from the nucleus to the cytoplasm by specific transport receptors, most of which belong to the evolutionarily conserved beta-importin family. Based on the available literature, we identified two candidates, Xpo-t and Xpo-5 for tRNA export in Trypanosoma brucei. However, down-regulation of expression of these genes did not disrupt the export of tRNAs to the cytoplasm. In search of alternative pathways, we tested the mRNA export complex Mex67-Mtr2, for a role in tRNA nuclear export, as described previously in yeast. Down-regulation of either exporter affected the subcellular distribution of tRNAs. However, contrary to yeast, TbMex67 and TbMtr2 accumulated different subsets of tRNAs in the nucleus. While TbMtr2 perturbed the export of all the tRNAs tested, silencing of TbMex67, led to the nuclear accumulation of tRNAs that are typically modified with queuosine. In turn, inhibition of tRNA nuclear export also affected the levels of queuosine modification in tRNAs. Taken together, the results presented demonstrate the dynamic nature of tRNA trafficking in T. brucei and its potential impact not only on the availability of tRNAs for protein synthesis but also on their modification status.

Indexed as

beta KaryopherinsBiological TransportCell NucleusCytoplasmGene Expression RegulationNucleic Acid ConformationNucleocytoplasmic Transport ProteinsNucleoside QProtein BindingProtein BiosynthesisProtozoan ProteinsRNA, MessengerRNA, ProtozoanRNA, Small InterferingRNA, TransferSignal Transductionbeta KaryopherinsNucleocytoplasmic Transport ProteinsNucleoside QProtozoan ProteinsRNA, MessengerRNA, ProtozoanRNA, Small InterferingRNA, Transfer

Identifiers

PMID31392978
PMCPMC6794378
OpenAlexW2967420789

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.