Evidence map›Paper›PMID 31392942›Full record

ArticleThe American journal of tropical medicine and hygiene2019

Identification of Enteropathogens by Multiplex PCR among Rural and Urban Guatemalan Children with Acute Diarrhea.

James T Gaensbauer, Molly Lamb, Diva M Calvimontes, Edwin J Asturias, Satoshi Kamidani, Ingrid L Contreras-Roldan, Samuel R Dominguez, Christine C Robinson, Alma Zacarias, Stephen Berman and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 3 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 3 syntheses or guidelines pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Consequences of Shigella infection in young children: a systematic review.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2023
    Pooled it
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Timing and genotype distribution of symptomatic and asymptomatic sapovirus infections and re-infections in a Nicaraguan birth cohort.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2023
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Sapovirus: an emerging cause of childhood diarrhea.Current opinion in infectious diseases · 2020
    Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

James T GaensbauerDepartment of Pediatrics, Denver Health Hospital Authority, Denver, Colorado.
Molly LambCenter for Global Health and Department of Epidemiology, Colorado School of Public Health, Aurora, Colorado.
Diva M CalvimontesHospital Roosevelt, Guatemala City, Guatemala.
Edwin J AsturiasDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, Colorado.
Satoshi KamidaniDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, Colorado.
Ingrid L Contreras-RoldanCentro de Estudios en Salud, Universidad de Valle de Guatemala, Guatemala, Guatemala.
Samuel R DominguezDepartment of Pathology and Laboratory Medicine, Children's Hospital Colorado, Aurora, Colorado.
Christine C RobinsonDepartment of Pathology and Laboratory Medicine, Children's Hospital Colorado, Aurora, Colorado.
Alma ZacariasCenter for Global Health and Department of Epidemiology, Colorado School of Public Health, Aurora, Colorado.
Stephen BermanDepartment of Pediatrics, University of Colorado School of Medicine, Aurora, Colorado.
Mario A MelgarHospital Roosevelt, Guatemala City, Guatemala.
University of Colorado Denver · USCenter for Global Health · USRoosevelt Hospital · GTChildren's Hospital Colorado · USDenver Health Medical Center · USUniversidad del Valle de Guatemala · GT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiplex polymerase chain reaction (PCR) platforms have enhanced understanding of intestinal pathogens in low- and middle-income countries (LMICs). However, few such studies have been performed in Latin America, where poverty, poor sanitation, and undernutrition persist. Multiplex PCR (BioFire, Salt Lake City, UT) was used to identify viral, bacterial, and parasitic pathogens in stool collected on day 1 and 31 from children aged 6 to 35 months with acute, non-bloody diarrhea in two locations (rural and urban) in Guatemala. We analyzed correlation between pathogens and clinical, demographic, and socioeconomic variables; described patterns of pathogen acquisition, persistence, and clearance over the 30-day period; and calculated population attributable fractions (PAFs) for diarrheal causation for individual pathogens. We analyzed 316 subjects (144 urban; 172 rural) enrolled between March 2015 and January 2016. Rural subjects had significantly more malnutrition, animal exposure, and unimproved water/sanitation infrastructure. The majority of subjects had multiple pathogens/sample (4.8 rural and 2.7 urban). Few meaningful correlates were identified between individual pathogens and clinical, demographic, or environmental variables.

Indexed as

Multiplex Polymerase Chain ReactionRural PopulationUrban PopulationAcute DiseaseAnimalsBacteriaChild, PreschoolCoinfectionDiarrheaFemaleGastrointestinal TractHumansInfantMaleParasitesViruses

Identifiers

PMID31392942
PMCPMC6726947
OpenAlexW2965996479

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.