Evidence map›Paper›PMID 31391357›Full record

ArticleMicrobes and environments2019

Sulfide-dependent Photoautotrophy in the Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus aggregans.

Nanako Kanno, Shin Haruta, Satoshi Hanada

Abstract read
In one paragraph

Article in Microbes and environments, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. The biotechnological potential of theApplied and environmental microbiology · 2024
    Review
  3. Article
  4. Motility Assays of Chloroflexus.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nanako KannoDepartment of Biological Sciences, Graduate School of Science, Tokyo Metropolitan University.
Shin HarutaDepartment of Biological Sciences, Graduate School of Science, Tokyo Metropolitan University.
Satoshi HanadaDepartment of Biological Sciences, Graduate School of Science, Tokyo Metropolitan University.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroflexus aggregans is a thermophilic filamentous anoxygenic phototrophic bacterium frequently found in microbial mats in natural hot springs. C. aggregans often thrives with cyanobacteria that engage in photosynthesis to provide it with an organic substrate; however, it sometimes appears as the dominant phototroph in microbial mats without cyanobacteria. This suggests that C. aggregans has the ability to grow photoautotrophically. However, photoautotrophic growth has not been observed in any cultured strains of C. aggregans. We herein attempted to isolate a photoautotrophic strain from C. aggregansdominated microbial mats in Nakabusa hot spring in Japan. Using an inorganic medium, we succeeded in isolating a new strain that we designated "ACA-12". A phylogenetic analysis based on 16S rRNA gene and 16S-23S rRNA gene internal transcribed spacer (ITS) region sequences revealed that strain ACA-12 was closely related to known C. aggregans strains. Strain ACA-12 showed sulfide consumption along with autotrophic growth under anaerobic light conditions. The deposited elemental sulfur particles observed by microscopy indicated that sulfide oxidation occurred, similar to that in photoautotrophic strains in the related species, C. aurantiacus. Moreover, we found that other strains of C. aggregans, including the type strain, also exhibited a slight photoautotrophic growing ability, whereas strain ACA-12 showed the fastest growth rate. This is the first demonstration of photoautotrophic growth with sulfide in C. aggregans. The present results strongly indicate that C. aggregans is associated with inorganic carbon incorporation using sulfide as an electron donor in hot spring microbial mats.

Indexed as

Phototrophic ProcessesBacterial ProteinsChloroflexusCulture MediaDNA, BacterialDNA, Ribosomal SpacerHot SpringsJapanLightOxidation-ReductionPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNASulfidesSulfurBacterial ProteinsCulture MediaDNA, BacterialDNA, Ribosomal SpacerRNA, Ribosomal, 16SSulfidesSulfurChloroflexus aggregansFilamentous anoxygenic phototrophic bacteriahot springphotoautotrophysulfide oxidation

Identifiers

PMID31391357
PMCPMC6759344

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.