Evidence map›Paper›PMID 31391303›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

An influenza virus-triggered SUMO switch orchestrates co-opted endogenous retroviruses to stimulate host antiviral immunity.

Nora Schmidt, Patricia Domingues, Filip Golebiowski, Corinna Patzina, Michael H Tatham, Ronald T Hay, Benjamin G Hale

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 111 citations in OpenAlex.

  1. Autoinflammatory syndromes of STING and TREX1 dysfunction.The Journal of clinical investigation · 2026
    Review
  2. Article
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  6. Article
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  9. SomaticiScience · 2025
    Article
  10. Review
  11. KAP1 in antiviral immunity: dual roles in viral silencing and immune regulation.Frontiers in cellular and infection microbiology · 2025
    Review
  12. Insights into the protein domains of C-VI TRIM subfamily in viral infection.Frontiers in cellular and infection microbiology · 2025
    Review
  13. Review
  14. Article
  15. Article
  16. Multifaceted role ofMedComm · 2024
    Review
  17. Review
  18. Article
  19. Human endogenous retroviruses and exogenous viral infections.Frontiers in cellular and infection microbiology · 2024
    Review
  20. The Immune Modulatory Role of TIF1 Proteins.Advances in experimental medicine and biology · 2024
    Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Nora SchmidtInstitute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland.
Patricia DominguesInstitute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland.
Filip GolebiowskiInstitute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland.
Corinna PatzinaInstitute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland.
Michael H TathamCentre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, DD1 5EH Dundee, United Kingdom.
Ronald T HayCentre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, DD1 5EH Dundee, United Kingdom.
Benjamin G HaleInstitute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland; hale.ben@virology.uzh.ch.ORCID 0000-0002-3891-9480
University of Zurich · CHUniversity of Dundee · GB

Funding

Cancer Research UK 21747Cancer Research UK C434/A13067Wellcome TrustWellcome Trust 098391/Z/12/Z
6 · The paper itself

Abstract

Dynamic small ubiquitin-like modifier (SUMO) linkages to diverse cellular protein groups are critical to orchestrate resolution of stresses such as genome damage, hypoxia, or proteotoxicity. Defense against pathogen insult (often reliant upon host recognition of "non-self" nucleic acids) is also modulated by SUMO, but the underlying mechanisms are incompletely understood. Here, we used quantitative SILAC-based proteomics to survey pan-viral host SUMOylation responses, creating a resource of almost 600 common and unique SUMO remodeling events that are mounted during influenza A and B virus infections, as well as during viral innate immune stimulation. Subsequent mechanistic profiling focused on a common infection-induced loss of the SUMO-modified form of TRIM28/KAP1, a host transcriptional repressor. By integrating knockout and reconstitution models with system-wide transcriptomics, we provide evidence that influenza virus-triggered loss of SUMO-modified TRIM28 leads to derepression of endogenous retroviral (ERV) elements, unmasking this cellular source of "self" double-stranded (ds)RNA. Consequently, loss of SUMO-modified TRIM28 potentiates canonical cytosolic dsRNA-activated IFN-mediated defenses that rely on RIG-I, MAVS, TBK1, and JAK1. Intriguingly, although wild-type influenza A virus robustly triggers this SUMO switch in TRIM28, the induction of IFN-stimulated genes is limited unless expression of the viral dsRNA-binding protein NS1 is abrogated. This may imply a viral strategy to antagonize such a host response by sequestration of induced immunostimulatory ERV dsRNAs. Overall, our data reveal that a key nuclear mechanism that normally prevents aberrant expression of ERV elements (ERVs) has been functionally co-opted via a stress-induced SUMO switch to augment antiviral immunity.

Indexed as

Host-Pathogen InteractionsMicrobial InteractionsAnimalsEndogenous RetrovirusesHumansImmunity, InnateInfluenza A virusInfluenza, HumanModels, BiologicalRNA, Double-StrandedSUMO-1 ProteinSumoylationTripartite Motif-Containing Protein 28Virus ReplicationRNA, Double-StrandedSUMO-1 ProteinTRIM28 protein, humanTripartite Motif-Containing Protein 28dsRNAendogenous retrovirusesinfluenzainterferonSUMO

Identifiers

PMID31391303
PMCPMC6717285
OpenAlexW2965529552

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.