Evidence map›Paper›PMID 31391253›Full record

ArticleThe Journal of biological chemistry2019

A hierarchical network of hypoxia-inducible factor and SMAD proteins governs procollagen lysyl hydroxylase 2 induction by hypoxia and transforming growth factor β1.

Tamara Rosell-García, Oscar Palomo-Álvarez, Fernando Rodríguez-Pascual

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Exosomal cargos-mediated metabolic reprogramming in tumor microenvironment.Journal of experimental & clinical cancer research : CR · 2023
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. ROS and TGFβ: from pancreatic tumour growth to metastasis.Journal of experimental & clinical cancer research : CR · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tamara Rosell-GarcíaCentro de Biología Molecular "Severo Ochoa," CSIC-Universidad Autónoma de Madrid (U.A.M.), E-28049 Madrid, Spain.ORCID 0000-0001-8784-2769
Oscar Palomo-ÁlvarezCentro de Biología Molecular "Severo Ochoa," CSIC-Universidad Autónoma de Madrid (U.A.M.), E-28049 Madrid, Spain.
Fernando Rodríguez-PascualCentro de Biología Molecular "Severo Ochoa," CSIC-Universidad Autónoma de Madrid (U.A.M.), E-28049 Madrid, Spain frodriguez@cbm.csic.es.ORCID 0000-0002-9765-9578
Centro de Biología Molecular Severo Ochoa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Collagens are extracellular matrix (ECM) proteins that support the structural and biomechanical integrity of many tissues. Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 (PLOD2) encodes the only lysyl hydroxylase (LH) isoform that specifically hydroxylates lysine residues in collagen telopeptides, a post-translational modification required for the formation of stabilized cross-links. PLOD2 expression is induced by hypoxia and transforming growth factor-β1 (TGF-β1), well-known stimuli for the formation of a fibrotic ECM, which can lead to pathological fibrosis underlying several diseases. Here, using human and murine fibroblasts, we studied the molecular determinants underlying hypoxia- and TGF-β1-induced PLOD2 expression and its impact on collagen biosynthesis. Deletion mapping and mutagenesis analysis identified specific binding sites for hypoxia-inducible factors (HIF) and TGF-β1-activated SMAD proteins on the human

Indexed as

3T3 CellsAnimalsBasic Helix-Loop-Helix ProteinsCell HypoxiaCell Line, TumorEndothelial PAS Domain-Containing Protein 1Extracellular MatrixFibroblastsHumansHypoxia-Inducible Factor 1MiceOxygenProcollagen-Lysine, 2-Oxoglutarate 5-DioxygenasePromoter Regions, GeneticSmad ProteinsTransforming Growth Factor beta1Basic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1Hypoxia-Inducible Factor 1OxygenPLOD2 protein, humanProcollagen-Lysine, 2-Oxoglutarate 5-DioxygenaseSmad ProteinsTransforming Growth Factor beta1collagenextracellular matrix (ECM)fibrosishypoxialysyl hydroxylaseprocollagen-lysine 2-oxoglutarate 5-dioxygenase 2 (PLOD2)pulmonary fibroblasttelopeptide hydroxylationtransforming growth factor beta (TGF-beta)

Identifiers

PMID31391253
PMCPMC6768653
OpenAlexW2965075228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.