Evidence map›Paper›PMID 31391113›Full record

ArticleParasites & vectors2019

Cystic echinococcosis in Nigeria: first insight into the genotypes of Echinococcus granulosus in animals.

John Asekhaen Ohiolei, Hong-Bin Yan, Li Li, Abdullahi Alhaji Magaji, Joshua Luka, Guo-Qiang Zhu, Clement Isaac, Manfred Ebube Odoya, Yan-Tao Wu, Mughees Aizaz Alvi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Genetic Characterization ofDiseases (Basel, Switzerland) · 2023
    Article
  6. Review
  7. Review
  8. Genotypes of Echinococcus Species from Cattle in Tanzania.The Korean journal of parasitology · 2021
    Article
  9. Prevalence ofVeterinary sciences · 2021
    Article
  10. Identification ofPathogens (Basel, Switzerland) · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

John Asekhaen OhioleiState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Hong-Bin YanState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Li LiState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Abdullahi Alhaji MagajiDepartment of Veterinary Public Health and Preventive Medicine, Faculty of Veterinary Medicine, Usmanu Danfodiyo University, Sokoto, Nigeria.
Joshua LukaDepartment of Veterinary Parasitology and Entomology, Faculty of Veterinary Medicine, University of Maiduguri, Maiduguri, Nigeria.
Guo-Qiang ZhuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Clement IsaacDepartment of Zoology, Faculty of Life Sciences, Ambrose Alli University, Ekpoma, Nigeria.
Manfred Ebube OdoyaDepartment of Zoology, Faculty of Life Sciences, Ambrose Alli University, Ekpoma, Nigeria.
Yan-Tao WuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Mughees Aizaz AlviState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Rosline James MukuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Bao-Quan FuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China.
Wan-Zhong JiaState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, P. R. China. jiawanzhong@caas.cn.
Lanzhou Veterinary Research Institute · CNAmbrose Alli University · NGUniversity of Maiduguri · NGUsmanu Danfodiyo University · NG

Funding

Central Public-interest Scientific Institution Basal Research Fund 1610312016012Central Public-interest Scientific Institution Basal Research Fund 1610312017001National Key Basic Research Program (973 Program) of China 2015CB150300National Key Research and Development Plan 2017YFD0501301
6 · The paper itself

Abstract

backgroundCystic echinococcosis (CE) is a zoonosis caused by cestodes of Echinococcus granulosus (sensu lato) complex. In Nigeria, reports on the prevalence of CE, although limited, have been found to vary with location and host with higher prevalence and fertility rate observed in camels than other livestock. Until now, information regarding the molecular characteristics, genetic population structure, and genotypes of Echinococcus is lacking. Therefore, this study was aimed at addressing these gaps in knowledge.

methodsWe describe the genetic status of 31 Echinococcus isolates collected from slaughtered livestock (camels, cattle and goats) based on the full-length mitochondrial cytochrome c oxidase subunit 1 (cox1) and NADH dehydrogenase subunit 1 (nad1) genes.

resultsThe resulting nucleotide sequences via the NCBI BLAST algorithm and Bayesian phylogeny of cox1 and cox1-nad1 genes using MrBayes v.3.1.2 showed that all isolates were clearly E. canadensis (G6/G7) and were 99-100% identical to previously reported G6/G7 haplotypes across Europe, Asia, North and East Africa.

conclusionsAlthough, the G1 genotype is believed to be responsible for the majority of global CE burden, reports from a number of West African countries including Nigeria suggest that E. canadensis G6/G7 genotype could be the major causative agent of CE in the subregion. This study provides for the first time insight into the genetic population structure of Echinococcus species as well as implications for CE control in Nigeria.

Indexed as

PhylogenyAbattoirsAnimalsCyclooxygenase 1EchinococcosisEchinococcus granulosusGenetics, PopulationGenetic VariationGenotypeHaplotypesLivestockNADH DehydrogenaseNigeriaCyclooxygenase 1NADH DehydrogenaseCystic echinococcosisEchinococcus canadensisGenetic variationHaplotypesPhylogeny

Identifiers

PMID31391113
PMCPMC6686243
OpenAlexW2964970778

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.