ArticleBMC plant biology2019
Genome-wide identification and expression analysis of the trihelix transcription factor family in tartary buckwheat (Fagopyrum tataricum).
Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed, 67 citations in OpenAlex.
- Trihelix transcription factors: versatile regulators in plant growth and development, abiotic, and biotic stress responses.Plant cell reports · 2026Review
- Genome-wide identification, phylogenetic analysis and expression pattern study of trihelix transcription factors in Pisum sativum L.Scientific reports · 2025Article
- Genome-wide identification of potato Trihelix gene family and its response to different abiotic stresses.BMC plant biology · 2025Article
- Genome-Wide Identification of the Trihelix Transcription Factor Family and Functional Analysis ofInternational journal of molecular sciences · 2024Article
- New insights into the evolution analysis of trihelix gene family in eggplant (Solanum melongena L.) and expression analysis under abiotic stress.BMC genomics · 2024Article
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- Genome-wide identification and expression analysis of the trihelix transcription factor family in sesame (Sesamum indicum L.) under abiotic stress.Molecular biology reports · 2023Article
- Genome-wide identification of trihelix transcription factors in the apple genome in silico.Journal of applied genetics · 2023Article
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- Conservation and Divergence of the Trihelix Genes in Brassica and Expression Profiles ofInternational journal of molecular sciences · 2022Article
- Genome-Wide Identification, Evolution, and Expression Pattern Analysis of theInternational journal of molecular sciences · 2022Article
- Physiological and Biochemical Regulation Mechanism of Exogenous Hydrogen Peroxide in Alleviating NaCl Stress Toxicity in Tartary Buckwheat (International journal of molecular sciences · 2022Article
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- Insights into the trihelix transcription factor responses to salt and other stresses in Osmanthus fragrans.BMC genomics · 2022Article
- Genome-wide identification and expression analysis of the bZIP transcription factor family genes in response to abiotic stress in Nicotiana tabacum L.BMC genomics · 2022Article
- Dynamic transcriptome analysis suggests the key genes regulating seed development and filling in Tartary buckwheat (Frontiers in genetics · 2022Article
- Tartary buckwheat database (TBD): an integrative platform for gene analysis of and biological information on Tartary buckwheat.Journal of Zhejiang University. Science. B · 2021Article
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8 authors at 2 institutions in 1 country.
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Abstract
backgroundIn the study, the trihelix family, also referred to as GT factors, is one of the transcription factor families. Trihelix genes play roles in the light response, seed maturation, leaf development, abiotic and biological stress and other biological activities. However, the trihelix family in tartary buckwheat (Fagopyrum tataricum), an important usable medicinal crop, has not yet been thoroughly studied. The genome of tartary buckwheat has recently been reported and provides a theoretical basis for our research on the characteristics and expression of trihelix genes in tartary buckwheat based at the whole level.
resultsIn the present study, a total of 31 FtTH genes were identified based on the buckwheat genome. They were named from FtTH1 to FtTH31 and grouped into 5 groups (GT-1, GT-2, SH4, GTγ and SIP1). FtTH genes are not evenly distributed on the chromosomes, and we found segmental duplication events of FtTH genes on tartary buckwheat chromosomes. According to the results of gene and motif composition, FtTH located in the same group contained analogous intron/exon organizations and motif organizations. qRT-PCR showed that FtTH family members have multiple expression patterns in stems, roots, leaves, fruits, and flowers and during fruit development.
conclusionsThrough our study, we identified 31 FtTH genes in tartary buckwheat and synthetically further analyzed the evolution and expression pattern of FtTH proteins. The structure and motif organizations of most genes are conserved in each subfamily, suggesting that they may be functionally conserved. The FtTH characteristics of the gene expression patterns indicate functional diversity in the time and space in the tartary buckwheat life process. Based on the discussion and analysis of FtTH gene function, we screened some genes closely related to the growth and development of tartary buckwheat. This will help us to further study the function of FtTH genes through experimental exploration in tartary buckwheat growth and improve the fruit of tartary buckwheat.
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