Evidence map›Paper›PMID 31390283›Full record

ArticleMolecular biology of the cell2019

NAD+ consumption by PARP1 in response to DNA damage triggers metabolic shift critical for damaged cell survival.

Michael M Murata, Xiangduo Kong, Emmanuel Moncada, Yumay Chen, Hiromi Imamura, Ping Wang, Michael W Berns, Kyoko Yokomori, Michelle A Digman

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed, 1 pooled it
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 1 synthesis or guideline pooled it, 211 citations in OpenAlex.

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  16. NADFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Michael M MurataDepartment of Biomedical Engineering, School of Engineering, University of California, Irvine, Irvine, CA 92697.
Xiangduo KongDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA 92697.
Emmanuel MoncadaBeckman Laser Institute and Medical Clinic, University of California, Irvine, Irvine, CA 92697.
Yumay ChenDepartment of Medicine, School of Medicine, University of California, Irvine, Irvine, CA 92697.
Hiromi ImamuraGraduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan.
Ping WangDepartment of Medicine, School of Medicine, University of California, Irvine, Irvine, CA 92697.
Michael W BernsDepartment of Biomedical Engineering, School of Engineering, University of California, Irvine, Irvine, CA 92697.
Kyoko YokomoriDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA 92697.
Michelle A DigmanDepartment of Biomedical Engineering, School of Engineering, University of California, Irvine, Irvine, CA 92697.
University of California, Irvine · USKyoto University · JP

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
TRD4: Phasor analysisP41GM103540 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI GRATTON, ENRICO · 2012 to 2020
$12.5M
Insulin's Control of Myocardial Mitochondria Bioenergetics and BiogenesisR01HL096987 · NHLBI · UNIVERSITY OF CALIFORNIA-IRVINE · PI WANG, PING H · 2010 to 2013
$1.5M
NCI NIH HHS P30 CA062203NHLBI NIH HHS R01 HL096987NIGMS NIH HHS P41 GM103540
6 · The paper itself

Abstract

DNA damage signaling is critical for the maintenance of genome integrity and cell fate decision. Poly(ADP-ribose) polymerase 1 (PARP1) is a DNA damage sensor rapidly activated in a damage dose- and complexity-dependent manner playing a critical role in the initial chromatin organization and DNA repair pathway choice at damage sites. However, our understanding of a cell-wide consequence of its activation in damaged cells is still limited. Using the phasor approach to fluorescence lifetime imaging microscopy and fluorescence-based biosensors in combination with laser microirradiation, we found a rapid cell-wide increase of the bound NADH fraction in response to nuclear DNA damage, which is triggered by PARP-dependent NAD+ depletion. This change is linked to the metabolic balance shift to oxidative phosphorylation (oxphos) over glycolysis. Inhibition of oxphos, but not glycolysis, resulted in parthanatos due to rapid PARP-dependent ATP deprivation, indicating that oxphos becomes critical for damaged cell survival. The results reveal the novel prosurvival response to PARP activation through a change in cellular metabolism and demonstrate how unique applications of advanced fluorescence imaging and laser microirradiation-induced DNA damage can be a powerful tool to interrogate damage-induced metabolic changes at high spatiotemporal resolution in a live cell.

Indexed as

DNA DamageDNA RepairCell NucleusCell SurvivalFibroblastsGlycolysisHeLa CellsHumansMCF-7 CellsMicroscopy, FluorescenceNADOptical ImagingOxidative PhosphorylationPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesSignal TransductionNADPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerases

Identifiers

PMID31390283
PMCPMC6740200
OpenAlexW2964813970

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.