Evidence map›Paper›PMID 31389636›Full record

ArticleMolecular microbiology2019

Mycobacterium tuberculosis requires glyoxylate shunt and reverse methylcitrate cycle for lactate and pyruvate metabolism.

Agnese Serafini, Lendl Tan, Stuart Horswell, Steven Howell, Daniel J Greenwood, Deborah M Hunt, Minh-Duy Phan, Mark Schembri, Mercedes Monteleone, Christine R Montague and 7 more

Abstract read
In one paragraph

Article in Molecular microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. Article
  3. A cloaked glutamate decarboxylase sustains the GABA shunt inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. eLife · 2026
    Article
  6. Article
  7. Article
  8. mSystems · 2026
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Itaconate mechanism of action and dissimilation inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Review
  18. Model systems to studyFrontiers in cellular and infection microbiology · 2025
    Review
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Agnese SerafiniMycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Lendl TanSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, 4072, Australia.
Stuart HorswellBioinformatics and Biostatistics Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Steven HowellMass Spectrometry Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Daniel J GreenwoodHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Deborah M HuntMycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Minh-Duy PhanSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, 4072, Australia.
Mark SchembriSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, 4072, Australia.
Mercedes MonteleoneMycobacterial Research Program, Centenary Institute of Cancer Medicine and Cell Biology, Camperdown, NSW, 2050, Australia.
Christine R MontagueDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.
Warwick BrittonMycobacterial Research Program, Centenary Institute of Cancer Medicine and Cell Biology, Camperdown, NSW, 2050, Australia.
Acely Garza-GarciaMycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Ambrosius P SnijdersMass Spectrometry Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Brian VanderVenDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.
Maximiliano G GutierrezHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.
Nicholas P WestSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, 4072, Australia.
Luiz Pedro S de CarvalhoMycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.ORCID 0000-0003-2875-4552

Funding

Wellcome Trust FC001060
6 · The paper itself

Abstract

Bacterial nutrition is an essential aspect of host-pathogen interaction. For the intracellular pathogen Mycobacterium tuberculosis (Mtb), the causative agent of tuberculosis in humans, fatty acids derived from lipid droplets are considered the major carbon source. However, many other soluble nutrients are available inside host cells and may be used as alternative carbon sources. Lactate and pyruvate are abundant in human cells and fluids, particularly during inflammation. In this work, we study Mtb metabolism of lactate and pyruvate combining classic microbial physiology with a 'multi-omics' approach consisting of transposon-directed insertion site sequencing (TraDIS), RNA-seq transcriptomics, proteomics and stable isotopic labelling coupled with mass spectrometry-based metabolomics. We discovered that Mtb is well adapted to use both lactate and pyruvate and that their metabolism requires gluconeogenesis, valine metabolism, the Krebs cycle, the GABA shunt, the glyoxylate shunt and the methylcitrate cycle. The last two pathways are traditionally associated with fatty acid metabolism and, unexpectedly, we found that in Mtb the methylcitrate cycle operates in reverse, to allow optimal metabolism of lactate and pyruvate. Our findings reveal a novel function for the methylcitrate cycle as a direct route for the biosynthesis of propionyl-CoA, the essential precursor for the biosynthesis of the odd-chain fatty acids.

Indexed as

Acyl Coenzyme ABacterial ProteinsCitratesCitrate (si)-SynthaseFatty AcidsGene Expression Regulation, BacterialGlyoxylatesLactic AcidMycobacterium tuberculosisPyruvic AcidTuberculosis2-methylcitric acidAcyl Coenzyme ABacterial ProteinsCitratesCitrate (si)-SynthaseFatty AcidsGlyoxylatesglyoxylic acidLactic Acidpropionyl-coenzyme APyruvic Acid

Identifiers

PMID31389636
PMCPMC6851703

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.