Evidence map›Paper›PMID 31388443›Full record

ArticleEvolution letters2019

Genomics of rapid ecological divergence and parallel adaptation in four tidal marsh sparrows.

Jennifer Walsh, Phred M Benham, Petra E Deane-Coe, Peter Arcese, Bronwyn G Butcher, Yvonne L Chan, Zachary A Cheviron, Chris S Elphick, Adrienne I Kovach, Brian J Olsen and 3 more

Open access · goldAbstract read
In one paragraph

Article in Evolution letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

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  10. Maintenance of local adaptation despite gene flow in a coastal songbird.Evolution; international journal of organic evolution · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 9 institutions in 2 countries.

Jennifer WalshFuller Evolutionary Biology Program Cornell Laboratory of Ornithology Ithaca New York 14850.
Phred M BenhamDivision of Biological Sciences University of Montana Missoula Montana 59812.
Petra E Deane-CoeFuller Evolutionary Biology Program Cornell Laboratory of Ornithology Ithaca New York 14850.
Peter ArceseDepartment of Forest and Conservation Sciences University of British Columbia Vancouver British Columbia T6T1Z4 Canada.
Bronwyn G ButcherFuller Evolutionary Biology Program Cornell Laboratory of Ornithology Ithaca New York 14850.
Yvonne L Chan'lolani School Honolulu Hawaii 96826.
Zachary A ChevironDivision of Biological Sciences University of Montana Missoula Montana 59812.
Chris S ElphickEcology and Evolutionary Biology University of Connecticut Storrs Connecticut 06269.
Adrienne I KovachDepartment of Natural Resources and the Environment University of New Hampshire Durham New Hampshire 03824.ORCID https://orcid.org/0000-0002-6791-0610
Brian J OlsenSchool of Biology and Ecology University of Maine Orono Maine 04469.
W Gregory ShriverDepartment of Entomology and Wildlife Ecology University of Delaware Newark Delaware 19716.
Virginia L WinderDepartment of Biology Benedictine College Atchison Kansas 66002.
Irby J LovetteFuller Evolutionary Biology Program Cornell Laboratory of Ornithology Ithaca New York 14850.
Cornell University · USUniversity of Montana · USBenedictine College · USIolani School · USUniversity of British Columbia · CAUniversity of Connecticut · USUniversity of Delaware · USUniversity of Maine · USUniversity of New Hampshire · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Theory suggests that different taxa having colonized a similar, challenging environment will show parallel or lineage-specific adaptations to shared selection pressures, but empirical examples of parallel evolution in independent taxa are exceedingly rare. We employed comparative genomics to identify parallel and lineage-specific responses to selection within and among four species of North American sparrows that represent four independent, post-Pleistocene colonization events by an ancestral, upland subspecies and a derived salt marsh specialist. We identified multiple cases of parallel adaptation in these independent comparisons following salt marsh colonization, including selection of 12 candidate genes linked to osmoregulation. In addition to detecting shared genetic targets of selection across multiple comparisons, we found many novel, species-specific signatures of selection, including evidence of selection of loci associated with both physiological and behavioral mechanisms of osmoregulation. Demographic reconstructions of all four species highlighted their recent divergence and small effective population sizes, as expected given their rapid radiation into saline environments. Our results highlight the interplay of both shared and lineage-specific selection pressures in the colonization of a biotically and abiotically challenging habitat and confirm theoretical expectations that steep environmental clines can drive repeated and rapid evolutionary diversification in birds.

Indexed as

Adaptationecological speciationnew world sparrowssalt marsh

Identifiers

PMID31388443
PMCPMC6675146
OpenAlexW2961712465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.