Evidence map›Paper›PMID 31385759›Full record

ArticleProtein and peptide letters2020

aeBlue Chromoprotein Color is Temperature Dependent.

Jessica Tamayo-Nuñez, Javier de la Mora, Felipe Padilla-Vaca, Naurú Idalia Vargas-Maya, Ángeles Rangel-Serrano, Fernando Anaya-Velázquez, Itzel Páramo-Pérez, Juana Elizabeth Reyes-Martínez, Beatríz Liliana España-Sánchez, Bernardo Franco

Open access · greenAbstract read
In one paragraph

Article in Protein and peptide letters, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jessica Tamayo-NuñezDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Javier de la MoraInstituto de Fisiologia Celular, Universidad Nacional Autonoma de Mexico, Circuito Exterior S/N, Mexico City, 04510, Mexico.
Felipe Padilla-VacaDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Naurú Idalia Vargas-MayaDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Ángeles Rangel-SerranoDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Fernando Anaya-VelázquezDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Itzel Páramo-PérezDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Juana Elizabeth Reyes-MartínezDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Beatríz Liliana España-SánchezCONACYT Centro de Investigacion y Desarrollo Tecnologico en Electroquimica SC. Parque Queretaro s/n Sanfandila, Pedro Escobedo Queretaro. C.P. 76703, Mexico.
Bernardo FrancoDepartamento de Biologia, Division de Ciencias Naturales y Exactas, Universidad de Guanajuato, Noria Alta s/n, Guanajuato, Gto. 36050, Mexico.
Universidad de Guanajuato · MXCenter of Research and Technologic Development in Electrochemistry · MXUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMarine sessile organisms display a color palette that is the result of the expression of fluorescent and non-fluorescent proteins. Fluorescent proteins have uncovered transcriptional regulation, subcellular localization of proteins, and the fate of cells during development. Chromoproteins have received less attention until recent years as bioreporters. Here, we studied the properties of aeBlue, a a 25.91 kDa protein from the anemone Actinia equina.

objectiveTo assess the properties of aeBlue chromoprotein under different physicochemical conditions.

methodsIn this article, during the purification of aeBlue we uncovered that it suffered a color shift when frozen. We studied the color shift by different temperature incubation and physicochemical conditions and light spectroscopy. To assess the possible structural changes in the protein, circular dichroism analysis, size exclusion chromatography and native PAGE was performed.

resultsWe uncover that aeBlue chromoprotein, when expressed from a synthetic construct in Escherichia coli, showed a temperature dependent color shift. Protein purified at 4 °C by metal affinity chromatography exhibited a pinkish color and shifts back at higher temperatures to its intense blue color. Circular dichroism analysis revealed that the structure in the pink form of the protein has reduced secondary structure at 4 °C, but at 35 °C and higher, the structure shifts to a native conformation and Far UV- vis CD spectra revealed the shift in an aromatic residue of the chromophore. Also, the chromophore retains its properties in a wide range of conditions (pH, denaturants, reducing and oxidants agents). Quaternary structure is also maintained as a tetrameric conformation as shown by native gel and size exclusion chromatography.

conclusionOur results suggest that the chromophore position in aeBlue is shifted from its native position rendering the pink color and the process to return it to its native blue conformation is temperature dependent.

Indexed as

Amino Acid SequenceAnimalsCloning, MolecularColorColoring AgentsEscherichia coliGene ExpressionHydrogen-Ion ConcentrationLightLuminescent ProteinsModels, MolecularOxidation-ReductionPigments, BiologicalProtein ConformationProtein DenaturationProteinsaeBlueColoring AgentsLuminescent ProteinsPigments, BiologicalProteinsAeblue chromoproteinbioreporterschromophorecold chain reportercolor shiftprotein secondary structure analysis.

Identifiers

PMID31385759
PMCPMC6978647
OpenAlexW2966812271

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.