Evidence map›Paper›PMID 31384359›Full record

ArticleThe World Allergy Organization journal2019

YRNAs overexpression and potential implications in allergy.

María Isidoro-García, Asunción García-Sánchez, Catalina Sanz, Miguel Estravís, Elena Marcos-Vadillo, Marien Pascual, Sergio Roa, Fernando Marques-García, Juan Carlos Triviño, Ignacio Dávila

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Article in The World Allergy Organization journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

María Isidoro-GarcíaDepartment of Clinical Biochemistry, University Hospital of Salamanca, Spain.
Asunción García-SánchezInstitute for Biomedical Research of Salamanca, Spain.
Catalina SanzInstitute for Biomedical Research of Salamanca, Spain.
Miguel EstravísInstitute for Biomedical Research of Salamanca, Spain.
Elena Marcos-VadilloDepartment of Clinical Biochemistry, University Hospital of Salamanca, Spain.
Marien PascualHemato-Oncology Program, Center for Applied Medical Research (CIMA), University of Navarra, Instituto de Investigación Sanitaria de Navarra (IdISNA), Pamplona, Spain.
Sergio RoaHemato-Oncology Program, Center for Applied Medical Research (CIMA), University of Navarra, Instituto de Investigación Sanitaria de Navarra (IdISNA), Pamplona, Spain.
Fernando Marques-GarcíaDepartment of Clinical Biochemistry, University Hospital of Salamanca, Spain.
Juan Carlos TriviñoSistemas Genómicos, Spain.
Ignacio DávilaInstitute for Biomedical Research of Salamanca, Spain.
Universidad de Salamanca · ESNavarre Institute of Health Research · ESSistemas Genómicos · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSmall non-coding RNAs (snRNAs) develop important functions related to epigenetic regulation. YRNAs are snRNAs involved in the initiation of DNA replication and RNA stability that regulate gene expression. They have been related to autoimmune, cancer and inflammatory diseases but never before to allergy. In this work we described for the first time in allergic patients the differential expression profile of YRNAs, their regulatory mechanisms and their potential as new diagnostic and therapeutic targets.

methodsFrom a previous whole RNAseq study in B cells of allergic patients, differential expression profiles of coding and non-coding transcripts were obtained. To select the most differentially expressed non coding transcripts, fold change and p-values were analyzed. A validation of the expression differences detected was developed in an independent cohort of 304 individuals, 208 allergic patients and 96 controls by using qPCR. Potential binding and retrotransponibility capacity were characterized by

resultsWe found that almost 70% of overexpressed non-coding transcripts in allergic patients corresponded to YRNAs. From the three more differentially overexpressed candidates, increased expression was independently confirmed in the peripheral blood of allergic patients. Structural analysis suggested a protein binding capacity decrease and an increase in retrotransponibility. Studies of RNA targets allowed the identification of sequences related to the immune mechanisms underlying allergy.

conclusionsOverexpression of YRNAs is observed for the first time in allergic patients. Structural and functional information points to their implication on regulatory mechanisms of the disease.

Indexed as

AllergyEpigeneticsExpressionncRNATranscriptomicsYRNAs

Identifiers

PMID31384359
PMCPMC6664241
OpenAlexW2964747876

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.