Evidence map›Paper›PMID 31383999›Full record

ArticleNature microbiology2019

Shigella-mediated oxygen depletion is essential for intestinal mucosa colonization.

Jean-Yves Tinevez, Ellen T Arena, Mark Anderson, Giulia Nigro, Louise Injarabian, Antonin André, Mariana Ferrari, François-Xavier Campbell-Valois, Anne Devin, Spencer L Shorte and 2 more

Abstract read
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

  1. Virulence · 2026
    Article
  2. Review
  3. Review
  4. Review
  5. ComparingGut microbes · 2025
    Article
  6. Review
  7. OFrontiers in cellular and infection microbiology · 2025
    Article
  8. Whole genome analysis ofFrontiers in veterinary science · 2025
    Article
  9. SPATEs promote the survival ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Gut metabolite L-lactate supportsProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. Functional assays to evaluate antibody-mediated responses againstFrontiers in cellular and infection microbiology · 2023
    Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. The T3SS ofMicroorganisms · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 5 countries.

Jean-Yves TinevezUTechS Photonic BioImaging (Imagopole), Institut Pasteur, Paris, France.
Ellen T ArenaUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Mark AndersonUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Giulia NigroUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Louise InjarabianUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Antonin AndréUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Mariana FerrariUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
François-Xavier Campbell-ValoisUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Anne DevinIBGC, CNRS UMR 5095, Université Bordeaux, Bordeaux, France.
Spencer L ShorteUTechS Photonic BioImaging (Imagopole), Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0002-2125-8663
Philippe J SansonettiUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France.
Benoit S MarteynUnité de Pathogénie Microbienne Moléculaire, Institut Pasteur, Paris, France. marteyn@pasteur.fr.ORCID http://orcid.org/0000-0001-5638-702X
Centre National de la Recherche Scientifique · FRInserm · FRUniversity of Ottawa · CAInstitut Pasteur · FRInstitut Pasteur Korea · KRUniversity of Wisconsin–Madison · US

Funding

European Research Council 232798
6 · The paper itself

Abstract

Pathogenic enterobacteria face various oxygen (O

Indexed as

AnimalsCell HypoxiaDisease Models, AnimalDysentery, BacillaryFemaleGuinea PigsHep G2 CellsHumansIntestinal MucosaOxygenRabbitsShigella flexneriType III Secretion SystemsOxygenType III Secretion Systems

Identifiers

PMID31383999
PMCPMC6817363
OpenAlexW2964628285

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.