Evidence map›Paper›PMID 31382929›Full record

ArticleBMC cancer2019

Germline and somatic mutations in patients with multiple primary melanomas: a next generation sequencing study.

Milena Casula, Panagiotis Paliogiannis, Fabrizio Ayala, Vincenzo De Giorgi, Ignazio Stanganelli, Mario Mandalà, Maria Colombino, Antonella Manca, Maria Cristina Sini, Corrado Caracò and 7 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Pathology and Molecular Biology of Melanoma.Current issues in molecular biology · 2023
    Review
  11. Next-generation sequencing in dermatology.Frontiers in medicine · 2023
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Melanoma susceptibility: an update on genetic and epigenetic findings.International journal of molecular epidemiology and genetics · 2021
    Review
  19. Review
  20. P14Genes · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Milena CasulaUnit of Cancer Genetics, Institute of Biomolecular Chemistry (ICB), National Research Council (CNR), Traversa La Crucca 3, Baldinca Li Punti, 07100, Sassari, Italy.
Panagiotis PaliogiannisDepartment of Medical, Surgical, and Experimental Sciences, University of Sassari, Sassari, Italy.
Fabrizio AyalaNational Tumor Institute "Fondazione G. Pascale", Napoli, Italy.
Vincenzo De GiorgiDepartment of Surgery and Translational Medicine, University of Florence, Florence, Italy.
Ignazio StanganelliDepartment of Dermatology, University of Parma, Parma, Italy.
Mario MandalàUnit of Medical Oncology, "Papa Giovanni XXIII" Hospital of Bergamo, Bergamo, Italy.
Maria ColombinoUnit of Cancer Genetics, Institute of Biomolecular Chemistry (ICB), National Research Council (CNR), Traversa La Crucca 3, Baldinca Li Punti, 07100, Sassari, Italy.
Antonella MancaUnit of Cancer Genetics, Institute of Biomolecular Chemistry (ICB), National Research Council (CNR), Traversa La Crucca 3, Baldinca Li Punti, 07100, Sassari, Italy.
Maria Cristina SiniUnit of Cancer Genetics, Institute of Biomolecular Chemistry (ICB), National Research Council (CNR), Traversa La Crucca 3, Baldinca Li Punti, 07100, Sassari, Italy.
Corrado CaracòNational Tumor Institute "Fondazione G. Pascale", Napoli, Italy.
Paolo Antonio AsciertoNational Tumor Institute "Fondazione G. Pascale", Napoli, Italy.
Rosanna Rita SattaDepartment of Medical, Surgical, and Experimental Sciences, University of Sassari, Sassari, Italy.
Melanoma Unit of Sassari (MUS)
Amelia LissiaDepartment of Medical, Surgical, and Experimental Sciences, University of Sassari, Sassari, Italy.
Antonio CossuDepartment of Medical, Surgical, and Experimental Sciences, University of Sassari, Sassari, Italy.
Giuseppe PalmieriUnit of Cancer Genetics, Institute of Biomolecular Chemistry (ICB), National Research Council (CNR), Traversa La Crucca 3, Baldinca Li Punti, 07100, Sassari, Italy. gpalmieri@yahoo.com.ORCID http://orcid.org/0000-0002-4350-2276
Italian Melanoma Intergroup (IMI)
University of Sassari · ITIstituto Nazionale Tumori IRCCS "Fondazione G. Pascale" · ITNational Research Council · ITOspedale Papa Giovanni XXIII · ITUniversity of Parma · IT

Funding

AIRC 21073
6 · The paper itself

Abstract

introductionMultiple primary melanomas (MPM) occur up to 8% of patients with cutaneous malignant melanoma (CMM). They are often sporadic harbouring several somatic mutations, but also familial cases harbouring a CDKN2A germline mutation have been describe in Caucasian populations. The aim of this study was to investigate the incidence, the distribution patterns and the impact of known and unknown germline and somatic mutations in patients with MPM from Italy. MATERIALS AND

methodsOne-hundred and two MPM patients were enrolled for germline mutation analysis, and five patients with at least four MPMs were identified for somatic mutation analysis. The demographic, pathologic and clinical features were retrieved from medical records. Molecular analysis for both germline and somatic mutations was performed in genomic DNA from peripheral blood and tissue samples, respectively, through a next generation sequencing approach, using a specific multiple-gene panel constructed by the Italian Melanoma Intergroup for somatic analysis and a commercial cancer hotspot panel for somatic analysis.

resultsCDKN2A mutations were detected in 6/16 (37.5%) and 3/86 (3.5%) MPM cases with and without family history for melanoma, respectively. Furthermore, multiple MC1R and, to a lesser extent, ATM variants have been identified. BAP1 variants were found only in MPM patients from southern Italy. The most frequent somatic variants were the pathogenic BRAF

conclusionsCDNK2A mutation is the most relevant susceptibility mutation in Italian patients with MPM, especially those with a family history for CMM. The prevalence of this mutation and other sequence variants identified in this study varies among specific sub-populations. Furthermore, some heterogeneity in driver somatic mutations between sporadic MPMs has been observed, as well as in a number of associated sequence variants the clinical impact of which needs to be further elucidated.

Indexed as

High-Throughput Nucleotide SequencingAdultAgedCarcinogenesisCutaneous Malignant MelanomaCyclin-Dependent Kinase Inhibitor p16FemaleFollow-Up StudiesGene AmplificationGene FrequencyGenetic LociGenetic Predisposition to DiseaseGerm-Line MutationHumansItalyMaleBAP1 protein, humanCDKN2A protein, humanCyclin-Dependent Kinase Inhibitor p16Tumor Suppressor ProteinsUbiquitin ThiolesteraseBRAFCancerCDKN2AMelanomaMutationsNGSSkin

Identifiers

PMID31382929
PMCPMC6683413
OpenAlexW2965588829

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.