Evidence map›Paper›PMID 31378303›Full record

ArticleBiological psychiatry2020

The SETD6 Methyltransferase Plays an Essential Role in Hippocampus-Dependent Memory Formation.

William M Webb, Ashleigh B Irwin, Mark E Pepin, Benjamin W Henderson, Victoria Huang, Anderson A Butler, Jeremy H Herskowitz, Adam R Wende, Andrew E Cash, Farah D Lubin

Open access · greenAbstract read
In one paragraph

Article in Biological psychiatry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Methyltransferase SET domain family and its relationship with cardiovascular development and diseases.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2022
    Article
  4. Purkinje Neurons with Loss of STIM1 Exhibit Age-Dependent Changes in Gene Expression and Synaptic Components.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

William M WebbDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama.
Ashleigh B IrwinDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama.
Mark E PepinDepartment of Biomedical Engineering, The University of Alabama at Birmingham, Birmingham, Alabama.
Benjamin W HendersonDepartment of Neurology, The University of Alabama at Birmingham, Birmingham, Alabama.
Victoria HuangDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama.
Anderson A ButlerDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama.
Jeremy H HerskowitzDepartment of Neurology, The University of Alabama at Birmingham, Birmingham, Alabama.
Adam R WendeDepartment of Biomedical Engineering, The University of Alabama at Birmingham, Birmingham, Alabama; Department of Pathology, The University of Alabama at Birmingham, Birmingham, Alabama.
Andrew E CashDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama.
Farah D LubinDepartment of Neurobiology, The University of Alabama at Birmingham, Birmingham, Alabama. Electronic address: flubin@uab.edu.
University of Alabama at Birmingham · US

Funding

Identifying therapeutic targets that confer synaptic resilience to Alzheimer's diseaseR01AG061800 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Christopher A. Gaiteri, Jeremy H. Herskowitz · 2018 to 2026
$6.9M
UAB Research Training Program in Neurobiology of Cognition and Cognitive DisordersT32NS061788 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Farah Dominique Lubin · 2008 to 2026
$4.5M
Identifying the molecular systems, networks, and key molecules that underlie cognitive resilienceR01AG057911 · NIA · UPSTATE MEDICAL UNIVERSITY · PI GAITERI, CHRISTOPHER A. · 2017 to 2021
$3.8M
UAB Neuroscience Roadmap Scholars ProgramR25NS089463 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LUBIN, FARAH DOMINIQUE · 2014 to 2024
$2.7M
Chromatin remodeling mechanisms of gene transcription in memoryR01MH097909 · NIMH · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LUBIN, FARAH DOMINIQUE · 2012 to 2016
$1.9M
Targeting Rho Kinases for Alzheimer's disease TherapeuticsR01AG054719 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HERSKOWITZ, JEREMY H. · 2017 to 2021
$1.9M
Epigenetic Mechanisms of Gene Regulation in Long-Term Memory FormationR00MH082106 · NIMH · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LUBIN, FARAH DOMINIQUE · 2009 to 2011
$737k
Chromatin Remodeling Mechanism of Gene Transcription in MemoryR56MH097909 · NIMH · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI LUBIN, FARAH DOMINIQUE · 2018 to 2018
$502k
NF-kB Methyl-Lysine Signaling in the Epigenetic Regulation of MemoryF30NS100340 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WEBB, WILLIAM MITCHELL · 2017 to 2020
$160k
GADD45B and Metabolic Memory in Diabetic Heart FailureF30HL137240 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI PEPIN, MARK EMILE · 2018 to 2019
$83k
NHLBI NIH HHS F30 HL137240NIA NIH HHS R01 AG054719NIA NIH HHS R01 AG057911NIA NIH HHS R01 AG061800NIMH NIH HHS R00 MH082106NIMH NIH HHS R01 MH097909NIMH NIH HHS R56 MH097909NINDS NIH HHS F30 NS100340NINDS NIH HHS R25 NS089463NINDS NIH HHS T32 NS061788
6 · The paper itself

Abstract

backgroundEpigenetic mechanisms are critical for hippocampus-dependent memory formation. Building on previous studies that implicate the N-lysine methyltransferase SETD6 in the activation of nuclear factor-κB RELA (also known as transcription factor p65) as an epigenetic recruiter, we hypothesized that SETD6 is a key player in the epigenetic control of long-term memory.

methodsUsing a series of molecular, biochemical, imaging, electrophysiological, and behavioral experiments, we interrogated the effects of short interfering RNA-mediated knockdown of Setd6 in the rat dorsal hippocampus during memory consolidation.

resultsOur findings demonstrate that SETD6 is necessary for memory-related nuclear factor-κB RELA methylation at lysine 310 and associated increases in H3K9me2 (histone H3 lysine 9 dimethylation) in the dorsal hippocampus and that SETD6 knockdown interferes with memory consolidation, alters gene expression patterns, and disrupts spine morphology.

conclusionsTogether, these findings suggest that SETD6 plays a critical role in memory formation and may act as an upstream initiator of H3K9me2 changes in the hippocampus during memory consolidation.

Indexed as

HippocampusMemoryAnimalsHistone-Lysine N-MethyltransferaseLysineMethylationRatsHistone-Lysine N-MethyltransferaseLysineEpigeneticsHippocampusHistone methylationMemory consolidationRELASETD6

Identifiers

PMID31378303
PMCPMC6906268
OpenAlexW2949715820

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.