Evidence map›Paper›PMID 31376286›Full record

ArticleBrain pathology (Zurich, Switzerland)2020

Putative risk alleles for LATE-NC with hippocampal sclerosis in population-representative autopsy cohorts.

Suvi R K Hokkanen, Mia Kero, Karri Kaivola, Sally Hunter, Hannah A D Keage, Anna Kiviharju, Anna Raunio, Pentti J Tienari, Anders Paetau, Fiona E Matthews and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Brain pathology (Zurich, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

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  5. A common Alu insertion in the 3'UTR of TMEM106B is associated with risk of dementia.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
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  6. Review
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  12. Prediction of neuropathologic lesions from clinical data.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 4 countries.

Suvi R K Hokkanen *Institute of Public Health, University of Cambridge, Cambridge, UK.
Mia Kero *Department of Pathology, University of Helsinki and HUSLAB, Helsinki University Hospital, Helsinki, Finland.ORCID 0000-0003-3730-0050
Karri KaivolaMolecular Neurology, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Sally HunterInstitute of Public Health, University of Cambridge, Cambridge, UK.
Hannah A D KeageCognitive Ageing and Impairment Neurosciences Laboratory, School of Psychology, Social Work and Social Policy, University of South Australia, Adelaide, Australia.
Anna KiviharjuMolecular Neurology, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Anna RaunioDepartment of Pathology, University of Helsinki and HUSLAB, Helsinki University Hospital, Helsinki, Finland.
Pentti J TienariMolecular Neurology, Research Programs Unit, University of Helsinki, Helsinki, Finland.
Anders PaetauDepartment of Pathology, University of Helsinki and HUSLAB, Helsinki University Hospital, Helsinki, Finland.
Fiona E MatthewsInstitute for Health and Society, Newcastle University, Newcastle upon Tyne, UK.
Jane FlemingInstitute of Public Health, University of Cambridge, Cambridge, UK.
Caroline GraffDivision of Neurogeriatrics, Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, J10:20, Visionsgatan 4, Solna, 171 64, Sweden.
Tuomo M PolvikoskiInstitute of Neuroscience, Newcastle University, Newcastle upon Tyne, UK.
Liisa MyllykangasDepartment of Pathology, University of Helsinki and HUSLAB, Helsinki University Hospital, Helsinki, Finland.
Carol BrayneInstitute of Public Health, University of Cambridge, Cambridge, UK.
EClipSE Collaboration
University of Helsinki · FIUniversity of Cambridge · GBNewcastle University · GBKarolinska University Hospital · SEUniversity of South Australia · AU

Funding

Department of HealthMedical Research Council G0400074Medical Research Council G0502157Medical Research Council G0900652Medical Research Council G1000691Medical Research Council G1100540Medical Research Council G9901400Medical Research Council MC_U105292687Medical Research Council MR/L022656/1UK Medical Research Council MRC.U.1052.00.013
6 · The paper itself

Abstract

Limbic-predominant age-related TAR-DNA-binding protein-43 (TDP-43) encephalopathy with hippocampal sclerosis pathology (LATE-NC + HS) is a neurodegenerative disorder characterized by severe hippocampal CA1 neuron loss and TDP-43-pathology, leading to cognitive dysfunction and dementia. Polymorphisms in GRN, TMEM106B and ABCC9 are proposed as LATE-NC + HS risk factors in brain bank collections. To replicate these results in independent population-representative cohorts, hippocampal sections from brains donated to three such studies (Cambridge City over 75-Cohort [CC75C], Cognitive Function and Ageing Study [CFAS], and Vantaa 85+ Study) were stained with hematoxylin-eosin (n = 744) and anti-pTDP-43 (n = 713), and evaluated for LATE-NC + HS and TDP-43 pathology. Single nucleotide polymorphism genotypes in GRN rs5848, TMEM106B rs1990622 and ABCC9 rs704178 were determined. LATE-NC + HS (n = 58) was significantly associated with the GRN rs5848 genotype (χ

Indexed as

AgedAged, 80 and overAllelesAutopsyBrain DiseasesCA1 Region, HippocampalCohort StudiesFemaleGenetic Predisposition to DiseaseHumansMaleMembrane ProteinsNerve Tissue ProteinsNeurodegenerative DiseasesPolymorphism, Single NucleotideProgranulinsGRN protein, humanMembrane ProteinsNerve Tissue ProteinsProgranulinsTMEM106B protein, humanABCC9GRNhippocampal sclerosisLATE-NCpopulation studyTDP-43TMEM106B

Identifiers

PMID31376286
PMCPMC7065086
OpenAlexW2966220904

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.