Evidence map›Paper›PMID 31375706›Full record

ArticleScientific reports2019

The population structure of Clostridium tetani deduced from its pan-genome.

Diana Chapeton-Montes, Lucile Plourde, Christiane Bouchier, Laurence Ma, Laure Diancourt, Alexis Criscuolo, Michel Robert Popoff, Holger Brüggemann

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

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  9. Comparative analysis of antigenic strength andSaudi journal of biological sciences · 2022
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  10. Review
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  15. Host and body site-specific adaptation ofNAR genomics and bioinformatics · 2020
    Article
  16. Review
  17. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Diana Chapeton-MontesBacterial Toxins, Institut Pasteur, Paris, France.
Lucile PlourdeSanofi-Pasteur, Marcy l'Etoile, France.ORCID http://orcid.org/0000-0003-1358-5792
Christiane BouchierGenomic Platform, Biomics, Institut Pasteur, Paris, France.
Laurence MaGenomic Platform, Biomics, Institut Pasteur, Paris, France.
Laure DiancourtCNR Bactéries anaérobies Botulisme, Institut Pasteur, Paris, France.
Alexis CriscuoloHub Bioinformatique Biostatistique, Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0002-8212-5215
Michel Robert PopoffBacterial Toxins, Institut Pasteur, Paris, France. popoff2m@gmail.com.ORCID http://orcid.org/0000-0001-9305-8989
Holger BrüggemannAarhus University, Department of Biomedicine, Aarhus, Denmark.
Institut Pasteur · FRAarhus University · DKSanofi (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridium tetani produces a potent neurotoxin, the tetanus neurotoxin (TeNT) that is responsible for the worldwide neurological disease tetanus, but which can be efficiently prevented by vaccination with tetanus toxoid. Until now only one type of TeNT has been characterized and very little information exists about the heterogeneity among C. tetani strains. We report here the genome sequences of 26 C. tetani strains, isolated between 1949 and 2017 and obtained from different locations. Genome analyses revealed that the C. tetani population is distributed in two phylogenetic clades, a major and a minor one, with no evidence for clade separation based on geographical origin or time of isolation. The chromosome of C. tetani is highly conserved; in contrast, the TeNT-encoding plasmid shows substantial heterogeneity. TeNT itself is highly conserved among all strains; the most relevant difference is an insertion of four amino acids in the C-terminal receptor-binding domain in four strains that might impact on receptor-binding properties. Other putative virulence factors, including tetanolysin and collagenase, are encoded in all genomes. This study highlights the population structure of C. tetani and suggests that tetanus-causing strains did not undergo extensive evolutionary diversification, as judged from the high conservation of its main virulence factors.

Indexed as

Clostridium tetaniCollagenasesConserved SequenceGenome, BacterialNeurotoxinsPhylogenySpecies SpecificityTetanus ToxinVirulence FactorsCollagenasesNeurotoxinstetanolysinTetanus ToxinVirulence Factors

Identifiers

PMID31375706
PMCPMC6677821
OpenAlexW2965318040

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.