Evidence map›Paper›PMID 31375574›Full record

ArticleJournal of virology2019

Primary HIV-1 Strains Use Nef To Downmodulate HLA-E Surface Expression.

Thomas van Stigt Thans, Janet I Akko, Annika Niehrs, Wilfredo F Garcia-Beltran, Laura Richert, Christina M Stürzel, Christopher T Ford, Hui Li, Christina Ochsenbauer, John C Kappes and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Resident CD49aScience advances · 2026
    Article
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  6. Article
  7. Article
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  9. Article
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  11. Review
  12. Article
  13. Review
  14. Article
  15. Instability of the HLA-E peptidome of HIV presents a major barrier to therapeutic targeting.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  16. Review
  17. Review
  18. Review
  19. Engaging innate immunity in HIV-1 cure strategies.Nature reviews. Immunology · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Thomas van Stigt Thans *Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Janet I Akko *Heinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Annika NiehrsHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Wilfredo F Garcia-BeltranRagon Institute of MGH, MIT, and Harvard, Cambridge, Massachusetts, USA.
Laura RichertHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Christina M StürzelInstitute of Molecular Virology, Ulm University Medical Center, Ulm, Germany.
Christopher T FordHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Hui LiDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Christina OchsenbauerDepartment of Medicine, Division of Hematology and Oncology, and CFAR, University of Alabama at Birmingham, Birmingham, Alabama, USA.
John C KappesDepartment of Medicine, Division of Hematology and Oncology, and CFAR, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Beatrice H HahnDepartment of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Frank KirchhoffInstitute of Molecular Virology, Ulm University Medical Center, Ulm, Germany.
Glòria MartrusHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.ORCID 0000-0003-2879-3201
Daniel SauterInstitute of Molecular Virology, Ulm University Medical Center, Ulm, Germany.
Marcus AltfeldHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany.
Angelique HölzemerHeinrich Pette Institute, Leibniz Institute for Experimental Virology, Hamburg, Germany angelique.hoelzemer@leibniz-hpi.de.
Leibniz Institute of Virology (LIV) · DEUniversität Ulm · DEUniversity of Alabama at Birmingham · USUniversity of Pennsylvania · USRagon Institute of MGH, MIT and Harvard · US

Funding

Viral and Host Determinants of HIV-1 TransmissionU01AI067854 · NIAID · DUKE UNIVERSITY · PI HARRISON, STEPHEN COPLAN · 2005 to 2005
$14.9M
Restriction of HIV-1 transmission by type 1 interferonsR01AI114266 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2014 to 2018
$3.2M
NIAID NIH HHS R01 AI114266NIAID NIH HHS U01 AI067854
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) has evolved elaborate ways to evade immune cell recognition, including downregulation of classical HLA class I (HLA-I) from the surfaces of infected cells. Recent evidence identified HLA-E, a nonclassical HLA-I, as an important part of the antiviral immune response to HIV-1. Changes in HLA-E surface levels and peptide presentation can prompt both CD8

Indexed as

Gene Expression RegulationBiomarkersCD4 Lymphocyte CountCD4-Positive T-LymphocytesCell LineCell MembraneHistocompatibility Antigens Class IHIV-1HIV InfectionsHLA-E AntigensHost-Pathogen InteractionsHumansImmunophenotypingnef Gene Products, Human Immunodeficiency VirusBiomarkersHistocompatibility Antigens Class IHLA-E Antigensnef Gene Products, Human Immunodeficiency VirusHIV-1HLA-ENef

Identifiers

PMID31375574
PMCPMC6798123
OpenAlexW2965754771

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.