Evidence map›Paper›PMID 31375460›Full record

ArticleImmunity2019

Class-Switch Recombination Occurs Infrequently in Germinal Centers.

Jonathan A Roco, Luka Mesin, Sebastian C Binder, Christian Nefzger, Paula Gonzalez-Figueroa, Pablo F Canete, Julia Ellyard, Qian Shen, Philippe A Robert, Jean Cappello and 10 more

Abstract read
In one paragraph

Article in Immunity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 317 papers.

0numbers the graph read from it
0cells of the map it votes in
317citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

317 citing papers in PubMed.

  1. Review
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  6. Targeting T follicular helper cells for lifelong health.Nature reviews. Drug discovery · 2026
    Review
  7. Article
  8. Article
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  14. Review
  15. Article
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  20. Article

257 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Jonathan A RocoDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Luka MesinLaboratory of Lymphocyte Dynamics, Rockefeller University, New York, NY, 10065, USA.
Sebastian C BinderDepartment of Systems Immunology and Braunschweig Integrated Centre of Systems Biology, Helmholtz Centre for Infection Research, Rebenring 56, 38106 Braunschweig, Germany.
Christian NefzgerDepartment of Anatomy and Developmental Biology and Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton VIC 3800, Australia.
Paula Gonzalez-FigueroaDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Pablo F CaneteDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Julia EllyardDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Qian ShenDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Philippe A RobertDepartment of Systems Immunology and Braunschweig Integrated Centre of Systems Biology, Helmholtz Centre for Infection Research, Rebenring 56, 38106 Braunschweig, Germany.
Jean CappelloDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Harpreet VohraDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia.
Yang ZhangInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Carla R NowosadLaboratory of Lymphocyte Dynamics, Rockefeller University, New York, NY, 10065, USA.
Arien SchiepersLaboratory of Lymphocyte Dynamics, Rockefeller University, New York, NY, 10065, USA.
Lynn M CorcoranMolecular Immunology Division, the Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia; Department of Medical Biology, The University of Melbourne, Parkville VIC 3052, Australia.
Kai-Michael ToellnerInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Jose M PoloDepartment of Anatomy and Developmental Biology and Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton VIC 3800, Australia.
Michael Meyer-HermannDepartment of Systems Immunology and Braunschweig Integrated Centre of Systems Biology, Helmholtz Centre for Infection Research, Rebenring 56, 38106 Braunschweig, Germany; Institute for Biochemistry, Biotechnology, and Bioinformatics, Technische Universität Braunschweig, Braunschweig, Germany.
Gabriel D VictoraLaboratory of Lymphocyte Dynamics, Rockefeller University, New York, NY, 10065, USA.
Carola G VinuesaDepartment of Immunology and Infectious Disease and Centre for Personalised Immunology, The John Curtin School of Medical Research, The Australian National University, Canberra ACT 0200, Australia; China-Australia Centre for Personalised Immunology, Department of Rheumatology, Shanghai Renji Hospital, Shanghai JiaoTong University, Shanghai, China. Electronic address: carola.vinuesa@anu.edu.au.

Funding

Dynamics of Antigen-Driven Selection in Germinal CentersR01AI119006 · NIAID · ROCKEFELLER UNIVERSITY · PI Gabriel D Victora · 2017 to 2026
$5.7M
Molecular control of germinal center selection and affinity maturationR01AI139117 · NIAID · ROCKEFELLER UNIVERSITY · PI Gabriel D Victora · 2018 to 2026
$3.9M
Biotechnology and Biological Sciences Research Council BB/S003800/1Medical Research Council G1001390NIAID NIH HHS R01 AI119006NIAID NIH HHS R01 AI139117
6 · The paper itself

Abstract

Class-switch recombination (CSR) is a DNA recombination process that replaces the immunoglobulin (Ig) constant region for the isotype that can best protect against the pathogen. Dysregulation of CSR can cause self-reactive BCRs and B cell lymphomas; understanding the timing and location of CSR is therefore important. Although CSR commences upon T cell priming, it is generally considered a hallmark of germinal centers (GCs). Here, we have used multiple approaches to show that CSR is triggered prior to differentiation into GC B cells or plasmablasts and is greatly diminished in GCs. Despite finding a small percentage of GC B cells expressing germline transcripts, phylogenetic trees of GC BCRs from secondary lymphoid organs revealed that the vast majority of CSR events occurred prior to the onset of somatic hypermutation. As such, we have demonstrated the existence of IgM-dominated GCs, which are unlikely to occur under the assumption of ongoing switching.

Indexed as

Immunoglobulin Class SwitchingAnimalsB-LymphocytesCell DifferentiationCells, CulturedGerminal CenterHumansMiceMice, Inbred C57BLPhylogenyPlasmablastic LymphomaPlasma CellsReceptors, Antigen, B-CellT-Lymphocytes, Helper-InducerReceptors, Antigen, B-Cell

Identifiers

PMID31375460
PMCPMC6914312

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.