Evidence map›Paper›PMID 31374894›Full record

ArticleMolecules (Basel, Switzerland)2019

Pharmacophoric Site Identification and Inhibitor Design for Autotaxin.

Myeong Hwi Lee, Dae-Yon Lee, Anand Balupuri, Jong-Woo Jeong, Nam Sook Kang

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. TWN-RENCOD: A novel method for protein binding site comparison.Computational and structural biotechnology journal · 2023
    Article
  2. TWN-FS method: A novel fragment screening method for drug discovery.Computational and structural biotechnology journal · 2023
    Article
  3. Design and Development of Autotaxin Inhibitors.Pharmaceuticals (Basel, Switzerland) · 2021
    Review
  4. Article
  5. Structure-Based Design of Biologically Active Compounds.Molecules (Basel, Switzerland) · 2020
    Article
  6. Benzoxaboroles-Novel Autotaxin Inhibitors.Molecules (Basel, Switzerland) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Myeong Hwi LeeGraduate School of New Drug Discovery and Development, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Korea.
Dae-Yon LeeLegoChem Biosciences, Inc., 8-26 Munoyeongseo-ro, Daedeok-gu, Daejeon 34302, Korea.
Anand BalupuriGraduate School of New Drug Discovery and Development, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Korea.ORCID 0000-0002-2904-0650
Jong-Woo JeongGraduate School of New Drug Discovery and Development, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Korea.
Nam Sook KangGraduate School of New Drug Discovery and Development, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Korea. nskang@cnu.ac.kr.
Chungnam National University · KR

Funding

the National Research Foundation of Korea 2017R1A2B4002827
6 · The paper itself

Abstract

Autotaxin (ATX) is a potential drug target that is associated with inflammatory diseases and various cancers. In our previous studies, we have designed several inhibitors targeting ATX using computational and experimental approaches. Here, we have analyzed topological water networks (TWNs) in the binding pocket of ATX. TWN analysis revealed a pharmacophoric site inside the pocket. We designed and synthesized compounds considering the identified pharmacophoric site. Furthermore, we performed biological experiments to determine their ATX inhibitory activities. High potency of the designed compounds supports the predictions of the TWN analysis.

Indexed as

Drug DesignStructure-Activity RelationshipHumansInflammationLysophospholipase DMolecular Docking SimulationNeoplasmsPhosphodiesterase InhibitorsPhosphoric Diester HydrolasesWaterLysophospholipase DPhosphodiesterase InhibitorsPhosphoric Diester HydrolasesWaterautotaxinmolecular dockingmolecular dynamics simulationtopological water networks

Identifiers

PMID31374894
PMCPMC6696049
OpenAlexW2966544622

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.