Evidence map›Paper›PMID 31373035›Full record

ArticleMagnetic resonance in medicine2019

Non-invasive imaging of oxygen concentration in a complex in vitro biofilm infection model using

Jeffrey W Simkins, Philip S Stewart, Sarah L Codd, Joseph D Seymour

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. The Challenges of OInternational journal of molecular sciences · 2022
    Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jeffrey W SimkinsCenter for Biofilm Engineering, Montana State University, Bozeman, Montana.
Philip S StewartCenter for Biofilm Engineering, Montana State University, Bozeman, Montana.
Sarah L CoddCenter for Biofilm Engineering, Montana State University, Bozeman, Montana.
Joseph D SeymourCenter for Biofilm Engineering, Montana State University, Bozeman, Montana.ORCID 0000-0003-4264-5416

Funding

Spatiotemporal Distribution of Oxygen in Biofilm InfectionsR01GM109452 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI STEWART, PHILIP S · 2013 to 2015
$891k
NIGMS NIH HHS R01 GM109452
6 · The paper itself

Abstract

purposeOxygen availability is a critical determinant of microbial biofilm activity and antibiotic susceptibility. However, measuring oxygen gradients in these systems remains difficult, with the standard microelectrode approach being both invasive and limited to single-point measurement. The goal of the study was to develop a

methodsOxygen-sensing beads were created by encapsulating an emulsion of oxygen-sensing fluorocarbon into alginate gel. Escherichia coli biofilms were grown in and on the alginate matrix, which was contained inside a packed bed column subjected to nutrient flow, mimicking the complex porous structure of human wound tissue, and subjected to antibiotic challenge.

resultsThe linear relationship between

conclusionsAntibiotic exposure temporarily causes oxygen consumption to enter a pseudosteady state wherein oxygen distribution becomes fixed; oxygen sink expansion resumes quickly after antibiotic clearance. This technique may provide valuable information for future investigations of biofilms by permitting the study of complex geometries (typical of in vivo biofilms) and facilitating noninvasive oxygen measurement.

Indexed as

BiofilmsFluorine-19 Magnetic Resonance ImagingSignal Processing, Computer-AssistedAlginatesAnti-Bacterial AgentsCalibrationEscherichia coliHumansOxygenWound HealingWound InfectionAlginatesAnti-Bacterial AgentsOxygenantibioticsbiofilmsinfection persistenceMRIoximetry

Identifiers

PMID31373035
PMCPMC6716988

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.