Evidence map›Paper›PMID 31372715›Full record

ArticleCurrent genetics2020

Altered metabolic regulation owing to gsp1 mutations encoding the nuclear small G protein in Saccharomyces cerevisiae.

Naoyuki Hayashi, Masaya Oki

Abstract read
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In one paragraph

Article in Current genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Naoyuki HayashiDepartment of Health and Nutrition, Faculty of Human Health Science, Kanazawa Gakuin University, 10 Sue-machi, Kanazawa, Ishikawa, 920-1392, Japan. n-hayashi@kanazawa-gu.ac.jp.ORCID http://orcid.org/0000-0001-9626-3689
Masaya OkiDepartment of Applied Chemistry and Biotechnology, Graduate School of Engineering, University of Fukui, 3-9-1 Bunkyo, Fukui, 910-8507, Japan.
Kanazawa Gakuin University · JPUniversity of Fukui · JP

Funding

the Ministry of Education, Culture, Sports, Science and Technology of Japan Grant Number 18K11084
6 · The paper itself

Abstract

Nutrient metabolism is regulated for adaptation to, for example, environmental alterations, cellular stress, cell cycle, and cellular ageing. This regulatory network consists of cross-talk between cytoplasmic organelles and the nucleus. The ras-like nuclear small G protein, Ran, functions in nuclear-cytosolic transport and regulatory signal transmission. In yeast, some genes involved in the Ran system in yeast are required for growth on glycerol medium. Growth deficiency, due to mutations in the GSP1 gene, which encodes Ran, is allele specific. Specifically in this study, the gsp1-1894 cells lost mitochondria, and could not grow on media containing glycerol, galactose or maltose. However, the gsp1-1894 cells grew better on a high salt medium (1 M NaCl) and had increased expression levels of GPD1-lacZ. Furthermore, disruption of the HOG1 gene suppressed their growth deficiency on glycerol medium. These findings suggest that altered activation of Hog1 in the gsp1-1894 cells resulted in the loss of mitochondria and inhibition of glycerol metabolism. Growth deficiency of the gsp1-1894 cells on galactose medium was further suppressed by high dosage of the SIP2 DNA, which encodes the cytosolic β subunit of AMPK. This suggests that higher cytosolic activity of AMPK is required for the utilization of an alternative carbon source in gsp1-1894 cells.

Indexed as

MutationAMP-Activated Protein Kinase KinasesGene Expression Regulation, FungalGlycerolMitochondriaMitogen-Activated Protein KinasesMonomeric GTP-Binding ProteinsNuclear ProteinsProtein KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionAMP-Activated Protein Kinase KinasesGlycerolGSP1 protein, S cerevisiaeHOG1 protein, S cerevisiaeMitogen-Activated Protein KinasesMonomeric GTP-Binding ProteinsNuclear ProteinsProtein KinasesSaccharomyces cerevisiae ProteinsAMPKGlycerol metabolismHOG1MitochondriaRan

Identifiers

PMID31372715
OpenAlexW2966012317

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.