Evidence map›Paper›PMID 31372457›Full record

ArticleData in brief2019

Data showing atherosclerosis-associated differentially methylated regions are often at enhancers.

Michelle Lacey, Carl Baribault, Kenneth C Ehrlich, Melanie Ehrlich

Open access · goldAbstract read
In one paragraph

Article in Data in brief, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michelle LaceyTulane Cancer Center, Tulane University Health Sciences Center, LA 70112, USA.
Carl BaribaultTulane Cancer Center, Tulane University Health Sciences Center, LA 70112, USA.
Kenneth C EhrlichCenter for Bioinformatics and Genomics, Tulane University Health Sciences Center, USA.
Melanie EhrlichTulane Cancer Center, Tulane University Health Sciences Center, LA 70112, USA.
Tulane University · US

Funding

UAB Center for Clinical and Translational Science (CCTS)UL1TR001417 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2015 to 2018
$31.4M
NCATS NIH HHS UL1 TR001417
6 · The paper itself

Abstract

Atherosclerosis involves phenotypic modulation and transdifferentiation of vascular smooth muscle cells (SMCs). Data are given in tabular or figure format that illustrate genome-wide DNA methylation alterations in atherosclerotic vs. control aorta (athero DMRs). Data based upon publicly available chromatin state profiles are also shown for normal aorta, monocyte, and skeletal muscle tissue-specific DMRs and for aorta-specific chromatin features (enhancer chromatin, promoter chromatin, repressed chromatin, actively transcribed chromatin). Athero hypomethylated and hypermethylated DMRs as well as epigenetic and transcription profiles are described for the following genes:

Indexed as

athero hypermeth DMR, atherosclerosis-associated hypermethylated DMRathero hypometh DMR, atherosclerosis-associated hypomethylated DMRAtherosclerosisctl, controlDifferentially methylated regions (DMRs)DMR, differentially methylated regionDNA methylationEnhancersenh, enhancer chromatinGO, gene ontologymod, moderateMonocytesPBMC, peripheral blood mononuclear cellsPMD, percent methylation differenceprom, promoter chromatinrepr, repressedSkM, skeletal muscleSmooth muscletxn chromatin, chromatin with the histone marks of actively transcribed chromatin

Identifiers

PMID31372457
PMCPMC6660590
OpenAlexW2921494277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.