Evidence map›Paper›PMID 31371345›Full record

ArticleCold Spring Harbor molecular case studies2019

Tumor heterogeneity and acquired drug resistance in FGFR2-fusion-positive cholangiocarcinoma through rapid research autopsy.

Melanie A Krook, Russell Bonneville, Hui-Zi Chen, Julie W Reeser, Michele R Wing, Dorrelyn M Martin, Amy M Smith, Thuy Dao, Eric Samorodnitsky, Anoosha Paruchuri and 8 more

Abstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed.

  1. Trial
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  13. Understanding and Overcoming Resistance to Selective FGFR Inhibitors across FGFR2-Driven Malignancies.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  14. Clinical Value of Liquid Biopsy in Patients with FGFR2 Fusion-Positive Cholangiocarcinoma During Targeted Therapy.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  15. The Irreversible FGFR Inhibitor KIN-3248 Overcomes FGFR2 Kinase Domain Mutations.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  16. Unveiling the mechanisms and challenges of cancer drug resistance.Cell communication and signaling : CCS · 2024
    Review
  17. Landscape of Clinical Resistance Mechanisms to FGFR Inhibitors in FGFR2-Altered Cholangiocarcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Melanie A Krook *Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Russell Bonneville *Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Hui-Zi ChenComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Julie W ReeserComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Michele R WingComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Dorrelyn M MartinComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Amy M SmithComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Thuy DaoComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Eric SamorodnitskyComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Anoosha ParuchuriComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Jharna MiyaComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Kaitlin R BakerComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Lianbo YuDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio 43210, USA.
Cynthia TimmersComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Kristin DittmarDepartment of Radiology, The Ohio State University, Columbus, Ohio 43210, USA.
Aharon G FreudComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.
Patricia AllenbyDepartment of Pathology, The Ohio State University, Columbus, Ohio 43210, USA.
Sameek RoychowdhuryComprehensive Cancer Center, The Ohio State University, Columbus, Ohio 43210, USA.

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
ONOCOLOGY TRAINING GRANTT32CA009338 · NCI · OHIO STATE UNIVERSITY · PI BYRD, JOHN C., POLLOCK, RAPHAEL E. · 1985 to 2018
$8.3M
Integrative Training in Biomedical SystemsT32GM068412 · NIGMS · OHIO STATE UNIVERSITY · PI PARVIN, JEFFREY D · 2005 to 2020
$2.4M
NRSA Training CoreTL1TR002735 · NCATS · OHIO STATE UNIVERSITY · PI BUMGARDNER, GINNY L, KIRSCHNER, LAWRENCE S · 2018 to 2022
$1.3M
Genomic characterization of tumor heterogeneity in recurrent small cell lung cancer through research autopsyK08CA241309 · NCI · OHIO STATE UNIVERSITY · PI CHEN, HUI-ZI · 2019 to 2023
$1.2M
Assay Validation of Targeted RNA sequencing to Detect Kinase Gene FusionsUH3CA202971 · NCI · OHIO STATE UNIVERSITY · PI ROYCHOWDHURY, SAMEEK · 2018 to 2020
$976k
Decoding tumors to achieve better clinical outcomesR50CA211529 · NCI · OHIO STATE UNIVERSITY · PI TIMMERS, CYNTHIA · 2017 to 2019
$515k
Detection of microsatellite instability biomarkers for therapeutic clinical trial eligibilityUH2CA216432 · NCI · OHIO STATE UNIVERSITY · PI ROYCHOWDHURY, SAMEEK · 2017 to 2017
$354k
Assay Validation of Targeted RNA sequencing to Detect Kinase Gene FusionsUH2CA202971 · NCI · OHIO STATE UNIVERSITY · PI ROYCHOWDHURY, SAMEEK · 2016 to 2016
$352k
NCATS NIH HHS TL1 TR002735NCI NIH HHS K08 CA241309NCI NIH HHS P30 CA016058NCI NIH HHS R50 CA211529NCI NIH HHS T32 CA009338NCI NIH HHS UH2 CA202971NCI NIH HHS UH2 CA216432NCI NIH HHS UH3 CA202971NIGMS NIH HHS T32 GM068412
6 · The paper itself

Abstract

Cholangiocarcinoma is a highly aggressive and lethal malignancy, with limited treatment options available. Recently, FGFR inhibitors have been developed and utilized in FGFR-mutant cholangiocarcinoma; however, resistance often develops and the genomic determinants of resistance are not fully characterized. We completed whole-exome sequencing (WES) of 11 unique tumor samples obtained from a rapid research autopsy on a patient with FGFR-fusion-positive cholangiocarcinoma who initially responded to the pan-FGFR inhibitor, INCB054828. In vitro studies were carried out to characterize the novel FGFR alteration and secondary

Indexed as

AutopsyCell Line, TumorCholangiocarcinomaClonal EvolutionDrug Resistance, NeoplasmExome SequencingHumansMaleMiddle AgedMorpholinesMutationProtein Kinase InhibitorsPyrimidinesPyrrolesReceptor, Fibroblast Growth Factor, Type 2FGFR2 protein, humanMorpholinespemigatinibProtein Kinase InhibitorsPyrimidinesPyrrolesReceptor, Fibroblast Growth Factor, Type 2biliary tract neoplasm

Identifiers

PMID31371345
PMCPMC6672025

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.