Evidence map›Paper›PMID 31368600›Full record

ArticleThe EMBO journal2019

Endosome and Golgi-associated degradation (EGAD) of membrane proteins regulates sphingolipid metabolism.

Oliver Schmidt, Yannick Weyer, Verena Baumann, Michael A Widerin, Sebastian Eising, Mihaela Angelova, Alexander Schleiffer, Leopold Kremser, Herbert Lindner, Matthias Peter and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 113 citations in OpenAlex.

  1. Review
  2. Article
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  4. ORMDL Proteins Turnover via Proteasome and Autophagy Is Cell-Type Dependent and Tied to Ceramide Homeostasis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
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  19. Article
  20. The Dsc complex and its role in Golgi quality control.Biochemical Society transactions · 2024
    Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Oliver SchmidtDivision of Cell Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0002-7921-4663
Yannick WeyerDivision of Cell Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Verena BaumannDivision of Cell Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Michael A WiderinDivision of Cell Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Sebastian EisingDepartment of Biology/Chemistry, University of Osnabrück, Osnabrück, Germany.
Mihaela AngelovaINSERM, Laboratory of Integrative Cancer Immunology, Sorbonne Université, Sorbonne Paris Cité, Université Paris Descartes, Centre de Recherche des Cordeliers, Université Paris Diderot, Paris, France.ORCID 0000-0002-0495-9695
Alexander SchleifferResearch Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.ORCID 0000-0001-6251-2747
Leopold KremserDivision of Clinical Biochemistry, Protein Micro-Analysis Facility, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Herbert LindnerDivision of Clinical Biochemistry, Protein Micro-Analysis Facility, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.
Matthias PeterInstitute of Biochemistry, ETH-Zürich, Zurich, Switzerland.
Florian FröhlichDepartment of Biology/Chemistry, University of Osnabrück, Osnabrück, Germany.ORCID 0000-0001-8307-2189
David TeisDivision of Cell Biology, Biocenter, Medical University of Innsbruck, Innsbruck, Austria.ORCID 0000-0002-8181-0253
Innsbruck Medical University · ATOsnabrück University · DEETH Zurich · CHInserm · FRInstitute of Molecular Biotechnology · AT

Funding

Austrian Science Fund FWF P 29583Austrian Science Fund FWF P 30263Austrian Science Fund FWF P 32161Austrian Science Fund FWF Y 444Swiss National Science Foundation
6 · The paper itself

Abstract

Cellular homeostasis requires the ubiquitin-dependent degradation of membrane proteins. This was assumed to be mediated exclusively either by endoplasmic reticulum-associated degradation (ERAD) or by endosomal sorting complexes required for transport (ESCRT)-dependent lysosomal degradation. We identified in Saccharomyces cerevisiae an additional pathway that selectively extracts membrane proteins at Golgi and endosomes for degradation by cytosolic proteasomes. One endogenous substrate of this endosome and Golgi-associated degradation pathway (EGAD) is the ER-resident membrane protein Orm2, a negative regulator of sphingolipid biosynthesis. Orm2 degradation is initiated by phosphorylation, which triggers its ER export. Once on Golgi and endosomes, Orm2 is poly-ubiquitinated by the membrane-embedded "Defective in SREBP cleavage" (Dsc) ubiquitin ligase complex. Cdc48/VCP then extracts ubiquitinated Orm2 from membranes, which is tightly coupled to the proteasomal degradation of Orm2. Thereby, EGAD prevents the accumulation of Orm2 at the ER and in post-ER compartments and promotes the controlled de-repression of sphingolipid biosynthesis. Thus, the selective degradation of membrane proteins by EGAD contributes to proteostasis and lipid homeostasis in eukaryotic cells.

Indexed as

Endoplasmic ReticulumEndoplasmic Reticulum-Associated DegradationGolgi ApparatusLipid MetabolismMembrane ProteinsPhosphorylationProteasome Endopeptidase ComplexProteolysisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSphingolipidsValosin Containing ProteinCDC48 protein, S cerevisiaeMembrane ProteinsOrm2 protein, S cerevisiaeProteasome Endopeptidase ComplexSaccharomyces cerevisiae ProteinsSphingolipidsValosin Containing ProteinendosomesGolgiproteasomesphingolipidsubiquitin

Identifiers

PMID31368600
PMCPMC6669922
OpenAlexW2947819726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.